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Getting 'Exon' information from database.
3NMQ
Asym. Unit
Info
Asym.Unit (79 KB)
Biol.Unit 1 (74 KB)
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(1)
Title
:
HSP90B N-TERMINAL DOMAIN IN COMPLEX WITH EC44, A PYRROLO-PYRIMIDINE METHOXYPYRIDINE INHIBITOR
Authors
:
J. W. Arndt, T. J. Yun, E. K. Harning, K. Giza, D. Rabah, P. Li, D. Luchetti A. Manning, M. R. Kehry
Date
:
22 Jun 10 (Deposition) - 22 Dec 10 (Release) - 05 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Atpase, Chaperone-Chaperone Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. J. Yun, E. K. Harning, K. Giza, D. Rabah, P. Li, J. W. Arndt, D. Luchetti, M. A. Biamonte, J. Shi, K. Lundgren, A. Manning, M. R. Kehr
Ec144, A Synthetic Inhibitor Of Heat Shock Protein 90, Blocks Innate And Adaptive Immune Responses In Models Of Inflammation And Autoimmunity.
J. Immunol. V. 186 563 2011
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 5-{2-AMINO-4-CHLORO-7-[(4-METHOXY-... (7PPa)
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Label:
No.
Name
Count
Type
Full Name
1
7PP
1
Ligand/Ion
5-{2-AMINO-4-CHLORO-7-[(4-METHOXY-3,5-DIMETHYLPYRIDIN-2-YL)METHYL]-7H-PYRROLO[2,3-D]PYRIMIDIN-5-YL}-2-METHYLPENT-4-YN-2-OL
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:51 , ALA A:55 , TYR A:61 , ASP A:93 , ILE A:96 , GLY A:97 , MET A:98 , ASP A:102 , LEU A:103 , PHE A:138 , TYR A:139 , TRP A:162 , HOH A:241 , HOH A:242 , HOH A:247 , HOH A:308
BINDING SITE FOR RESIDUE 7PP A 1
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: HSP90 (A:38-47)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HSP90
PS00298
Heat shock hsp90 proteins family signature.
HS90B_HUMAN
33-42
1
A:38-47
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Exons
(5, 5)
Info
All Exons
Exon 1.3b (A:13-54)
Exon 1.4b (A:55-123)
Exon 1.5a (A:124-177)
Exon 1.6 (A:177-221)
Exon 1.7 (A:222-226)
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All Exon Boundaries
1: Boundary 1.1a/1.3b
2: Boundary 1.3b/1.4b
3: Boundary 1.4b/1.5a
4: Boundary 1.5a/1.6
5: Boundary 1.6/1.7
6: Boundary 1.7/1.8
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000371646
1a
ENSE00001361028
chr6:
44214824-44214932
109
HS90B_HUMAN
-
0
0
-
-
1.3b
ENST00000371646
3b
ENSE00002201694
chr6:
44216367-44216513
147
HS90B_HUMAN
1-49
49
1
A:13-54
42
1.4b
ENST00000371646
4b
ENSE00002189486
chr6:
44217114-44217320
207
HS90B_HUMAN
50-118
69
1
A:55-123
69
1.5a
ENST00000371646
5a
ENSE00002183060
chr6:
44217412-44217571
160
HS90B_HUMAN
119-172
54
1
A:124-177
54
1.6
ENST00000371646
6
ENSE00002150570
chr6:
44217758-44217891
134
HS90B_HUMAN
172-216
45
1
A:177-221
45
1.7
ENST00000371646
7
ENSE00002189784
chr6:
44218028-44218336
309
HS90B_HUMAN
217-319
103
1
A:222-226
5
1.8
ENST00000371646
8
ENSE00002147387
chr6:
44218785-44218950
166
HS90B_HUMAN
320-375
56
0
-
-
1.9
ENST00000371646
9
ENSE00001140344
chr6:
44219155-44219345
191
HS90B_HUMAN
375-438
64
0
-
-
1.10
ENST00000371646
10
ENSE00001140336
chr6:
44219474-44219621
148
HS90B_HUMAN
439-488
50
0
-
-
1.11d
ENST00000371646
11d
ENSE00000974672
chr6:
44219736-44220004
269
HS90B_HUMAN
488-577
90
0
-
-
1.12
ENST00000371646
12
ENSE00000974673
chr6:
44220782-44221115
334
HS90B_HUMAN
578-689
112
0
-
-
1.13a
ENST00000371646
13a
ENSE00001427294
chr6:
44221226-44221620
395
HS90B_HUMAN
689-724
36
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3nmqa_ (A:)
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Folds
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)
Superfamilies
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)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Superfamily
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Family
:
Heat shock protein 90, HSP90, N-terminal domain
(238)
Protein domain
:
automated matches
(112)
Human (Homo sapiens) [TaxId: 9606]
(94)
1a
d3nmqa_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_HATPase_c_3nmqA01 (A:40-193)
2a: PFAM_HSP90_3nmqA02 (A:196-226)
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)
Clan
:
His_Kinase_A
(147)
Family
:
HATPase_c
(132)
Homo sapiens (Human)
(95)
1a
HATPase_c-3nmqA01
A:40-193
Clan
:
no clan defined [family: HSP90]
(107)
Family
:
HSP90
(107)
Homo sapiens (Human)
(84)
2a
HSP90-3nmqA02
A:196-226
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Chain A
Asymmetric Unit 1
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