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3NM8
Asym. Unit
Info
Asym.Unit (108 KB)
Biol.Unit 1 (103 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TYROSINASE FROM BACILLUS MEGATERIUM
Authors
:
M. Sendovski, M. Kanteev, N. Adir, A. Fishman
Date
:
22 Jun 10 (Deposition) - 17 Nov 10 (Release) - 26 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Tyrosinase, Type3 Copper Proteins, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Sendovski, M. Kanteev, V. Shuster Ben-Yosef, N. Adir, A. Fishman
First Structures Of An Active Bacterial Tyrosinase Reveal Copper Plasticity
J. Mol. Biol. V. 405 227 2011
(for further references see the
PDB file header
)
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Hetero Components
(3, 17)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
6
Ligand/Ion
CHLORIDE ION
2
CU
4
Ligand/Ion
COPPER (II) ION
3
ZN
7
Ligand/Ion
ZINC ION
[
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:42 , HIS A:60 , HOH A:339 , HOH A:340 , HOH A:344 , CU A:502
BINDING SITE FOR RESIDUE CU A 501
02
AC2
SOFTWARE
HIS A:204 , HIS A:208 , HIS A:231 , HOH A:344 , CU A:501
BINDING SITE FOR RESIDUE CU A 502
03
AC3
SOFTWARE
HIS A:13 , ASP A:287 , CL A:506 , CL A:507
BINDING SITE FOR RESIDUE ZN A 503
04
AC4
SOFTWARE
HIS A:279 , HOH A:329 , HOH A:332 , HOH A:333
BINDING SITE FOR RESIDUE ZN A 504
05
AC5
SOFTWARE
HIS A:245
BINDING SITE FOR RESIDUE ZN A 505
06
AC6
SOFTWARE
LYS A:9 , HIS A:13 , ASP A:287 , ZN A:503 , CL A:507
BINDING SITE FOR RESIDUE CL A 506
07
AC7
SOFTWARE
HIS A:13 , ASP A:287 , ILE A:288 , ZN A:503 , CL A:506 , GLN B:101
BINDING SITE FOR RESIDUE CL A 507
08
AC8
SOFTWARE
HIS B:42 , HIS B:60 , HOH B:307 , HOH B:308 , HOH B:454 , CU B:502
BINDING SITE FOR RESIDUE CU B 501
09
AC9
SOFTWARE
HIS B:204 , HIS B:208 , HIS B:231 , HOH B:307 , CU B:501
BINDING SITE FOR RESIDUE CU B 502
10
BC1
SOFTWARE
HIS B:13 , ASP B:287 , CL B:507 , CL B:508
BINDING SITE FOR RESIDUE ZN B 503
11
BC2
SOFTWARE
HIS B:279 , HOH B:330 , CL B:509 , CL B:510
BINDING SITE FOR RESIDUE ZN B 504
12
BC3
SOFTWARE
HIS A:49
BINDING SITE FOR RESIDUE ZN A 304
13
BC4
SOFTWARE
GLU B:71 , ARG B:75 , THR B:271 , HOH B:309 , HOH B:359
BINDING SITE FOR RESIDUE ZN B 506
14
BC5
SOFTWARE
MET A:100 , GLN A:101 , HOH A:407 , HIS B:13 , ASP B:287 , ILE B:288 , ZN B:503 , CL B:508
BINDING SITE FOR RESIDUE CL B 507
15
BC6
SOFTWARE
LYS B:9 , HIS B:13 , ASP B:287 , ZN B:503 , CL B:507
BINDING SITE FOR RESIDUE CL B 508
16
BC7
SOFTWARE
ALA B:239 , HIS B:279 , HOH B:343 , ZN B:504 , CL B:510
BINDING SITE FOR RESIDUE CL B 509
17
BC8
SOFTWARE
ALA B:239 , ILE B:243 , HIS B:279 , ZN B:504 , CL B:509
BINDING SITE FOR RESIDUE CL B 510
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3nm8a_ (A:)
1b: SCOP_d3nm8b_ (B:)
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Protein Domains
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(
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
Di-copper centre-containing domain
(47)
Superfamily
:
Di-copper centre-containing domain
(47)
Family
:
automated matches
(12)
Protein domain
:
automated matches
(12)
Bacillus megaterium [TaxId: 1404]
(12)
1a
d3nm8a_
A:
1b
d3nm8b_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Tyrosinase_3nm8B01 (B:32-244)
1b: PFAM_Tyrosinase_3nm8B02 (B:32-244)
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Clan
:
Di-copper
(13)
Family
:
Tyrosinase
(10)
Bacillus megaterium
(6)
1a
Tyrosinase-3nm8B01
B:32-244
1b
Tyrosinase-3nm8B02
B:32-244
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Asymmetric Unit 1
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