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3NHA
Asym. Unit
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Asym.Unit (101 KB)
Biol.Unit 1 (95 KB)
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(1)
Title
:
NUCLEOTIDE BINDING DOMAIN OF HUMAN ABCB6 (ADP MG BOUND STRUCTURE)
Authors
:
M. Haffke, A. Menzel, Y. Carius, D. Jahn, D. W. Heinz
Date
:
14 Jun 10 (Deposition) - 25 Aug 10 (Release) - 21 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Abc-Transporter, Abcb6, Nucleotide Binding Domain, Heme Biosynthesis, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Haffke, A. Menzel, Y. Carius, D. Jahn, D. W. Heinz
Structures Of The Nucleotide-Binding Domain Of The Human Abcb6 Transporter And Its Complexes With Nucleotides.
Acta Crystallogr. , Sect. D V. 66 979 2010
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Hetero Components
(4, 5)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2a: BETA-MERCAPTOETHANOL (BMEa)
2b: BETA-MERCAPTOETHANOL (BMEb)
3a: MAGNESIUM ION (MGa)
4a: PHOSPHATE ION (PO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
BME
2
Ligand/Ion
BETA-MERCAPTOETHANOL
3
MG
1
Ligand/Ion
MAGNESIUM ION
4
PO4
1
Ligand/Ion
PHOSPHATE ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:113 , LEU A:750 , LEU A:769 , CYS A:773 , THR A:787
BINDING SITE FOR RESIDUE PO4 A 1
2
AC2
SOFTWARE
MG A:3 , HOH A:48 , HOH A:105 , HOH A:133 , GLU A:562 , TYR A:599 , THR A:605 , GLY A:626 , ALA A:627 , GLY A:628 , LYS A:629 , SER A:630 , THR A:631
BINDING SITE FOR RESIDUE ADP A 2
3
AC3
SOFTWARE
ADP A:2 , HOH A:48 , HOH A:78 , HOH A:105 , HOH A:133 , GLU A:562
BINDING SITE FOR RESIDUE MG A 3
4
AC4
SOFTWARE
PHE A:639
BINDING SITE FOR RESIDUE BME A 4
5
AC5
SOFTWARE
ILE A:666 , GLY A:667 , VAL A:668 , LYS A:743
BINDING SITE FOR RESIDUE BME A 5
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_070604 (G579E, chain A, )
2: VAR_029749 (R648Q, chain A, )
3: VAR_067395 (L811V, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_070604
G
579
E
ABCB6_HUMAN
Disease (DUH3)
---
A
G
579
E
2
UniProt
VAR_029749
R
648
Q
ABCB6_HUMAN
Polymorphism
13402964
A
R
648
Q
3
UniProt
VAR_067395
L
811
V
ABCB6_HUMAN
Disease (MCOPCB7)
---
A
L
811
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ABC_TRANSPORTER_1 (A:727-741)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ABC_TRANSPORTER_1
PS00211
ABC transporters family signature.
ABCB6_HUMAN
727-741
1
A:727-741
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Exons
(0, 0)
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All Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_ABC_tran_3nhaA01 (A:630-755)
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Clan
:
P-loop_NTPase
(1112)
Family
:
ABC_tran
(53)
Homo sapiens (Human)
(8)
1a
ABC_tran-3nhaA01
A:630-755
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Chain A
Asymmetric Unit 1
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