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3NE2
Biol. Unit 1
Info
Asym.Unit (619 KB)
Biol.Unit 1 (307 KB)
Biol.Unit 2 (306 KB)
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(1)
Title
:
ARCHAEOGLOBUS FULGIDUS AQUAPORIN
Authors
:
J. K. Lee, J. S. Finer-Moore, R. M. Stroud, Center For Structures Of Proteins (Csmp)
Date
:
08 Jun 10 (Deposition) - 22 Sep 10 (Release) - 22 Sep 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Transmembrane Helices, Water Channel, Structural Genomics, Psi-2, Protein Structure Initiative, Center For Structures Of Membrane Proteins, Csmp, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
J. K. Lee, J. S. Finer-Moore, R. M. Stroud
Archaeoglobus Fulgidus Aquaporin
To Be Published
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: B-OCTYLGLUCOSIDE (BOGa)
1b: B-OCTYLGLUCOSIDE (BOGb)
1c: B-OCTYLGLUCOSIDE (BOGc)
1d: B-OCTYLGLUCOSIDE (BOGd)
1e: B-OCTYLGLUCOSIDE (BOGe)
1f: B-OCTYLGLUCOSIDE (BOGf)
1g: B-OCTYLGLUCOSIDE (BOGg)
1h: B-OCTYLGLUCOSIDE (BOGh)
1i: B-OCTYLGLUCOSIDE (BOGi)
View:
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No.
Name
Count
Type
Full Name
1
BOG
5
Ligand/Ion
B-OCTYLGLUCOSIDE
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Sites
(6, 6)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
5: AC7 (SOFTWARE)
6: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
THR D:2 , ARG D:8 , GLY D:75 , ARG D:76 , ILE D:77 , SER D:78 , GLY D:79 , HIS D:81 , ARG D:99 , BOG D:248
BINDING SITE FOR RESIDUE BOG D 247
2
AC4
SOFTWARE
GLY D:94 , ARG D:95 , BOG D:247
BINDING SITE FOR RESIDUE BOG D 248
3
AC5
SOFTWARE
PHE A:17
BINDING SITE FOR RESIDUE BOG A 247
4
AC6
SOFTWARE
LEU A:120 , PRO A:125 , LEU A:213 , MET A:214 , BOG A:249
BINDING SITE FOR RESIDUE BOG A 248
5
AC7
SOFTWARE
BOG A:248
BINDING SITE FOR RESIDUE BOG A 249
6
AC8
SOFTWARE
GLU C:246 , PRO G:172 , ILE H:71 , ARG H:76 , VAL H:165 , ALA H:166 , ALA H:171 , PRO H:172 , PRO H:173 , GLY H:174 , ALA H:176 , GLY H:177
BINDING SITE FOR RESIDUE BOG H 249
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: MIP (A:81-89,B:81-89,C:81-89,D:81-89)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MIP
PS00221
MIP family signature.
AQPM_ARCFU
81-89
4
A:81-89
B:81-89
C:81-89
D:81-89
-
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3ne2a_ (A:)
1b: SCOP_d3ne2b_ (B:)
1c: SCOP_d3ne2c_ (C:)
1d: SCOP_d3ne2d_ (D:)
1e: SCOP_d3ne2e_ (E:)
1f: SCOP_d3ne2f_ (F:)
1g: SCOP_d3ne2g_ (G:)
1h: SCOP_d3ne2h_ (H:)
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Protein Domains
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(
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Organisms
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)
(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Aquaporin-like
(34)
Superfamily
:
Aquaporin-like
(34)
Family
:
automated matches
(12)
Protein domain
:
automated matches
(12)
Archaeoglobus fulgidus [TaxId: 2234]
(1)
1a
d3ne2a_
A:
1b
d3ne2b_
B:
1c
d3ne2c_
C:
1d
d3ne2d_
D:
1e
d3ne2e_
E:
1f
d3ne2f_
F:
1g
d3ne2g_
G:
1h
d3ne2h_
H:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_MIP_3ne2H01 (H:2-240)
1b: PFAM_MIP_3ne2H02 (H:2-240)
1c: PFAM_MIP_3ne2H03 (H:2-240)
1d: PFAM_MIP_3ne2H04 (H:2-240)
1e: PFAM_MIP_3ne2H05 (H:2-240)
1f: PFAM_MIP_3ne2H06 (H:2-240)
1g: PFAM_MIP_3ne2H07 (H:2-240)
1h: PFAM_MIP_3ne2H08 (H:2-240)
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(
)
Clan
:
no clan defined [family: MIP]
(17)
Family
:
MIP
(17)
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
(1)
1a
MIP-3ne2H01
H:2-240
1b
MIP-3ne2H02
H:2-240
1c
MIP-3ne2H03
H:2-240
1d
MIP-3ne2H04
H:2-240
1e
MIP-3ne2H05
H:2-240
1f
MIP-3ne2H06
H:2-240
1g
MIP-3ne2H07
H:2-240
1h
MIP-3ne2H08
H:2-240
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (619 KB)
Header - Asym.Unit
Biol.Unit 1 (307 KB)
Header - Biol.Unit 1
Biol.Unit 2 (306 KB)
Header - Biol.Unit 2
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