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3N7H
Asym. Unit
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Asym.Unit (111 KB)
Biol.Unit 1 (103 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ODORANT BINDING PROTEIN 1 FROM ANOPHELES GAMBIAE (AGAMOBP1) WITH DEET (N,N-DIETHYL-META-TOLUAMIDE) AND PEG
Authors
:
K. E. Tsitsanou, S. E. Zographos
Date
:
27 May 10 (Deposition) - 08 Jun 11 (Release) - 18 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Transport Protein, Insect Odorant Binding Protein, Obp1, Agamobp1, Deet, N, N-Diethyl-Meta-Toluamide, Olfaction
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
K. E. Tsitsanou, T. Thireou, C. E. Drakou, K. Koussis, M. V. Keramioti, D. D. Leonidas, E. Eliopoulos, K. Iatrou, S. E. Zographos
Anopheles Gambiae Odorant Binding Protein Crystal Complex With The Synthetic Repellent Deet: Implications For Structure-Based Design Of Novel Mosquito Repellents.
Cell. Mol. Life Sci. V. 69 283 2012
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Hetero Components
(5, 16)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: N,N-DIETHYL-3-METHYLBENZAMIDE (DE3a)
2b: N,N-DIETHYL-3-METHYLBENZAMIDE (DE3b)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
4a: METHANOL (MOHa)
4b: METHANOL (MOHb)
4c: METHANOL (MOHc)
4d: METHANOL (MOHd)
4e: METHANOL (MOHe)
4f: METHANOL (MOHf)
4g: METHANOL (MOHg)
4h: METHANOL (MOHh)
5a: 2,5,8,11,14,17,20,23,26,29,32,35,3... (PEUa)
5b: 2,5,8,11,14,17,20,23,26,29,32,35,3... (PEUb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
DE3
2
Ligand/Ion
N,N-DIETHYL-3-METHYLBENZAMIDE
3
MG
2
Ligand/Ion
MAGNESIUM ION
4
MOH
8
Ligand/Ion
METHANOL
5
PEU
2
Ligand/Ion
2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:344 , HOH A:345 , HOH A:346 , HOH A:347 , HOH A:348 , HOH A:349
BINDING SITE FOR RESIDUE MG A 126
2
AC2
SOFTWARE
LEU A:73 , LEU A:76 , HIS A:77 , ALA A:88 , MET A:89 , GLY A:92 , TRP A:114 , HOH A:360 , DE3 B:132
BINDING SITE FOR RESIDUE DE3 A 129
3
AC3
SOFTWARE
ALA A:62 , SER A:79 , PHE A:123
BINDING SITE FOR RESIDUE PEU A 130
4
AC4
SOFTWARE
HIS A:77 , HIS A:85 , LYS B:93
BINDING SITE FOR RESIDUE CL A 131
5
AC5
SOFTWARE
HOH A:162 , HOH A:336 , HOH A:337 , HOH A:338 , HOH A:339 , HOH A:385
BINDING SITE FOR RESIDUE MG A 132
6
AC6
SOFTWARE
LYS A:93 , ARG A:94 , DE3 A:129 , LEU B:73 , LEU B:76 , HIS B:77 , LEU B:80 , ALA B:88 , MET B:89 , GLY B:92 , TRP B:114 , HOH B:153
BINDING SITE FOR RESIDUE DE3 B 132
7
AC7
SOFTWARE
LEU B:19 , ALA B:62 , SER B:79 , PHE B:123
BINDING SITE FOR RESIDUE PEU B 133
8
AC8
SOFTWARE
GLU B:44 , ILE B:45
BINDING SITE FOR RESIDUE CL B 134
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3n7ha_ (A:)
1b: SCOP_d3n7hb_ (B:)
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Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
Insect pheromone/odorant-binding proteins
(68)
Family
:
automated matches
(18)
Protein domain
:
automated matches
(18)
Anopheles gambiae [TaxId: 180454]
(3)
1a
d3n7ha_
A:
1b
d3n7hb_
B:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (111 KB)
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Biol.Unit 1 (103 KB)
Header - Biol.Unit 1
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