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3N5W
Asym. Unit
Info
Asym.Unit (303 KB)
Biol.Unit 1 (296 KB)
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(1)
Title
:
STRUCTURE OF NEURONAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN COMPLEX WITH 6,6'-(2,2'-(PYRIDINE-3,5-DIYL)BIS(ETHANE-2,1-DIYL))BIS(4-METHYLPYRIDIN-2-AMINE)
Authors
:
H. Li, S. L. Delker, T. L. Poulos
Date
:
25 May 10 (Deposition) - 09 Feb 11 (Release) - 09 Feb 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.73
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Heme Enzyme, Nitric Oxide Synthase, Substrate Inhibitor, Zn Binding', Oxidoreductase, Oxidoreductase-Oxidoreductase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
S. L. Delker, F. Xue, H. Li, J. Jamal, R. B. Silverman, T. L. Poulos
Role Of Zinc In Isoform-Selective Inhibitor Binding To Neuronal Nitric Oxide Synthase .
Biochemistry V. 49 10803 2010
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Hetero Components
(5, 13)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4a: 6,6'-(PYRIDINE-3,5-DIYLDIETHANE-2,... (XFJa)
4b: 6,6'-(PYRIDINE-3,5-DIYLDIETHANE-2,... (XFJb)
4c: 6,6'-(PYRIDINE-3,5-DIYLDIETHANE-2,... (XFJc)
4d: 6,6'-(PYRIDINE-3,5-DIYLDIETHANE-2,... (XFJd)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
5c: ZINC ION (ZNc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CL
2
Ligand/Ion
CHLORIDE ION
3
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
XFJ
4
Ligand/Ion
6,6'-(PYRIDINE-3,5-DIYLDIETHANE-2,1-DIYL)BIS(4-METHYLPYRIDIN-2-AMINE)
5
ZN
3
Ligand/Ion
ZINC ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:409 , CYS A:415 , SER A:457 , MET A:570 , PHE A:584 , SER A:585 , TRP A:587 , MET A:589 , GLU A:592 , ARG A:596 , TRP A:678 , XFJ A:800 , XFJ A:805 , HOH A:1007 , HOH A:1090 , HOH A:1124
BINDING SITE FOR RESIDUE HEM A 750
02
AC2
SOFTWARE
ARG A:414 , GLN A:478 , VAL A:567 , PHE A:584 , TRP A:587 , GLU A:592 , ARG A:596 , TYR A:706 , HEM A:750 , HOH A:1055 , HOH A:1075 , TRP B:306
BINDING SITE FOR RESIDUE XFJ A 800
03
AC3
SOFTWARE
ASP A:600 , VAL A:677 , TRP A:678 , VAL A:680 , HEM A:750 , ZN A:901 , CL A:910 , TRP B:306 , ASP B:309 , PHE B:691 , HIS B:692
BINDING SITE FOR RESIDUE XFJ A 805
04
AC4
SOFTWARE
TRP A:587 , VAL A:649 , HOH A:1091 , HOH A:1138 , HOH A:1193
BINDING SITE FOR RESIDUE ACT A 860
05
AC5
SOFTWARE
ASP A:600 , XFJ A:805 , ZN A:901 , HIS B:692
BINDING SITE FOR RESIDUE CL A 910
06
AC6
SOFTWARE
CYS A:326 , CYS A:331 , CYS B:326 , CYS B:331
BINDING SITE FOR RESIDUE ZN A 900
07
AC7
SOFTWARE
ASP A:600 , XFJ A:805 , CL A:910 , HIS B:692
BINDING SITE FOR RESIDUE ZN A 901
08
AC8
SOFTWARE
HIS A:692 , ASP B:600 , XFJ B:805 , CL B:910
BINDING SITE FOR RESIDUE ZN A 719
09
AC9
SOFTWARE
TRP B:409 , CYS B:415 , SER B:457 , MET B:570 , PHE B:584 , SER B:585 , TRP B:587 , GLU B:592 , ARG B:596 , TRP B:678 , XFJ B:800 , XFJ B:805 , HOH B:1284 , HOH B:1368 , HOH B:1411
BINDING SITE FOR RESIDUE HEM B 750
10
BC1
SOFTWARE
TRP A:306 , ARG B:414 , GLN B:478 , VAL B:567 , PHE B:584 , TRP B:587 , GLU B:592 , ARG B:596 , TYR B:706 , HEM B:750 , HOH B:1347 , HOH B:1348
BINDING SITE FOR RESIDUE XFJ B 800
11
BC2
SOFTWARE
TRP A:306 , ASP A:309 , PHE A:691 , HIS A:692 , ZN A:719 , ASP B:600 , VAL B:677 , TRP B:678 , VAL B:680 , HEM B:750 , CL B:910 , HOH B:1465
BINDING SITE FOR RESIDUE XFJ B 805
12
BC3
SOFTWARE
TRP B:587 , VAL B:649 , HOH B:1344 , HOH B:1420 , HOH B:1441 , HOH B:1498
BINDING SITE FOR RESIDUE ACT B 860
13
BC4
SOFTWARE
SER A:686 , HIS A:692 , ZN A:719 , ARG B:596 , ASP B:600 , XFJ B:805
BINDING SITE FOR RESIDUE CL B 910
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: NOS (A:414-421,B:414-421)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NOS
PS60001
Nitric oxide synthase (NOS) signature.
NOS1_RAT
414-421
2
A:414-421
B:414-421
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3n5wa_ (A:)
1b: SCOP_d3n5wb_ (B:)
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Protein Domains
(
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(
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Superfamily
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Family
:
Nitric oxide (NO) synthase oxygenase domain
(313)
Protein domain
:
Nitric oxide (NO) synthase oxygenase domain
(298)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(154)
1a
d3n5wa_
A:
1b
d3n5wb_
B:
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_NO_synthase_3n5wB01 (B:348-717)
1b: PFAM_NO_synthase_3n5wB02 (B:348-717)
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Clan
:
no clan defined [family: NO_synthase]
(140)
Family
:
NO_synthase
(140)
Rattus norvegicus (Rat)
(79)
1a
NO_synthase-3n5wB01
B:348-717
1b
NO_synthase-3n5wB02
B:348-717
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Asymmetric Unit 1
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Asym.Unit (303 KB)
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