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3MZK
Asym. Unit
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Asym.Unit (464 KB)
Biol.Unit 1 (456 KB)
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(1)
Title
:
SEC13/SEC16 COMPLEX, S.CEREVISIAE
Authors
:
J. R. Whittle, T. U. Schwartz
Date
:
12 May 10 (Deposition) - 18 Aug 10 (Release) - 18 Aug 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.69
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Alpha-Helical-Stack, Beta-Propeller, Protein Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. R. Whittle, T. U. Schwartz
Structure Of The Sec13-Sec16 Edge Element, A Template For Assembly Of The Copii Vesicle Coat.
J. Cell Biol. V. 190 347 2010
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Hetero Components
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Sites
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Exons
(1, 2)
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Exon 1.1 (A:1-297 | D:1-297)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YLR208W
1
YLR208W.1
XII:559553-560446
894
SEC13_YEAST
1-297
297
2
A:1-297
D:1-297
297
297
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SCOP Domains
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CATH Domains
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Pfam Domains
(3, 14)
Info
all PFAM domains
1a: PFAM_WD40_3mzkD01 (D:195-235)
1b: PFAM_WD40_3mzkD02 (D:195-235)
1c: PFAM_WD40_3mzkD03 (D:195-235)
1d: PFAM_WD40_3mzkD04 (D:195-235)
1e: PFAM_WD40_3mzkD05 (D:195-235)
1f: PFAM_WD40_3mzkD06 (D:195-235)
1g: PFAM_WD40_3mzkD07 (D:195-235)
1h: PFAM_WD40_3mzkD08 (D:195-235)
1i: PFAM_WD40_3mzkD09 (D:195-235)
1j: PFAM_WD40_3mzkD10 (D:195-235)
2a: PFAM_Sec16_3mzkC01 (C:992-1094)
2b: PFAM_Sec16_3mzkC02 (C:992-1094)
3a: PFAM_Sec16_C_3mzkC03 (C:1135-1390)
3b: PFAM_Sec16_C_3mzkC04 (C:1135-1390)
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Clans
(
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Families
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Organisms
(
)
(
)
Clan
:
Beta_propeller
(192)
Family
:
WD40
(64)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(18)
1a
WD40-3mzkD01
D:195-235
1b
WD40-3mzkD02
D:195-235
1c
WD40-3mzkD03
D:195-235
1d
WD40-3mzkD04
D:195-235
1e
WD40-3mzkD05
D:195-235
1f
WD40-3mzkD06
D:195-235
1g
WD40-3mzkD07
D:195-235
1h
WD40-3mzkD08
D:195-235
1i
WD40-3mzkD09
D:195-235
1j
WD40-3mzkD10
D:195-235
Clan
:
no clan defined [family: Sec16]
(1)
Family
:
Sec16
(1)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
2a
Sec16-3mzkC01
C:992-1094
2b
Sec16-3mzkC02
C:992-1094
Clan
:
no clan defined [family: Sec16_C]
(1)
Family
:
Sec16_C
(1)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
3a
Sec16_C-3mzkC03
C:1135-1390
3b
Sec16_C-3mzkC04
C:1135-1390
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Asym.Unit (464 KB)
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