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3MUP
Asym. Unit
Info
Asym.Unit (157 KB)
Biol.Unit 1 (149 KB)
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(1)
Title
:
CIAP1-BIR3 DOMAIN IN COMPLEX WITH THE SMAC-MIMETIC COMPOUND SMAC037
Authors
:
F. Cossu, F. Malvezzi, G. Canevari, M. Milani
Date
:
03 May 10 (Deposition) - 24 Nov 10 (Release) - 19 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Zinc-Finger Motif, Apoptosis Inhibitor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Cossu, F. Malvezzi, G. Canevari, E. Mastrangelo, D. Lecis, D. Delia P. Seneci, C. Scolastico, M. Bolognesi, M. Milani
Recognition Of Smac-Mimetic Compounds By The Bir Domain Of Ciap1
Protein Sci. V. 19 2418 2010
[
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: (3S,6S,7R,9AS)-6-{[(2S)-2-AMINOBUT... (SMKa)
1b: (3S,6S,7R,9AS)-6-{[(2S)-2-AMINOBUT... (SMKb)
1c: (3S,6S,7R,9AS)-6-{[(2S)-2-AMINOBUT... (SMKc)
1d: (3S,6S,7R,9AS)-6-{[(2S)-2-AMINOBUT... (SMKd)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SMK
4
Ligand/Ion
(3S,6S,7R,9AS)-6-{[(2S)-2-AMINOBUTANOYL]AMINO}-7-(2-AMINOETHYL)-N-(DIPHENYLMETHYL)-5-OXOOCTAHYDRO-1H-PYRROLO[1,2-A]AZEPINE-3-CARBOXAMIDE
2
ZN
4
Ligand/Ion
ZINC ION
[
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:24 , VAL A:298 , LYS A:299 , GLY A:306 , LEU A:307 , ARG A:308 , CYS A:309 , GLU A:311 , ASP A:314 , GLU A:319 , TRP A:323
BINDING SITE FOR RESIDUE SMK A 600
2
AC2
SOFTWARE
CYS A:300 , CYS A:303 , HIS A:320 , CYS A:327
BINDING SITE FOR RESIDUE ZN A 1
3
AC3
SOFTWARE
VAL B:298 , GLY B:306 , LEU B:307 , ARG B:308 , CYS B:309 , GLU B:311 , ASP B:314 , GLU B:319 , TRP B:323 , LEU D:354
BINDING SITE FOR RESIDUE SMK B 600
4
AC4
SOFTWARE
CYS B:300 , CYS B:303 , HIS B:320 , CYS B:327
BINDING SITE FOR RESIDUE ZN B 2
5
AC5
SOFTWARE
VAL C:298 , GLY C:306 , LEU C:307 , ARG C:308 , CYS C:309 , GLU C:311 , ASP C:314 , GLU C:319 , LYS C:322 , TRP C:323
BINDING SITE FOR RESIDUE SMK C 600
6
AC6
SOFTWARE
CYS C:300 , CYS C:303 , HIS C:320 , CYS C:327
BINDING SITE FOR RESIDUE ZN C 3
7
AC7
SOFTWARE
LEU B:354 , ARG C:294 , VAL D:298 , GLY D:306 , LEU D:307 , ARG D:308 , CYS D:309 , GLU D:311 , ASP D:314 , GLU D:319 , TRP D:323
BINDING SITE FOR RESIDUE SMK D 600
8
AC8
SOFTWARE
CYS D:300 , CYS D:303 , HIS D:320 , CYS D:327
BINDING SITE FOR RESIDUE ZN D 4
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: BIR_REPEAT_1 (-|-|A:263-330,B:263-330,C:263-330,...)
2: BIR_REPEAT_2 (-|-|A:266-331,B:266-331,C:266-331,...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BIR_REPEAT_1
PS01282
BIR repeat.
BIRC2_HUMAN
46-113
184-250
269-336
4
-
-
A:263-330
B:263-330
C:263-330
D:263-330
2
BIR_REPEAT_2
PS50143
BIR repeat profile.
BIRC2_HUMAN
49-114
187-251
272-337
4
-
-
A:266-331
B:266-331
C:266-331
D:266-331
[
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Exons
(4, 16)
Info
All Exons
Exon 1.3d (A:254-293 | B:255-293 | C:254-293 ...)
Exon 1.4 (A:293-326 | B:293-326 | C:293-326 ...)
Exon 1.5b (A:326-352 | B:326-352 | C:326-352 ...)
Exon 1.6b (A:353-354 | B:353-354 | C:353-356 ...)
View:
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All Exon Boundaries
1: Boundary 1.1e/1.3d
2: Boundary 1.3d/1.4
3: Boundary 1.4/1.5b
4: Boundary 1.5b/1.6b
5: Boundary 1.6b/1.7
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1e
ENST00000227758
1e
ENSE00001373030
chr11:
102217966-102218107
142
BIRC2_HUMAN
-
0
0
-
-
1.3d
ENST00000227758
3d
ENSE00002190786
chr11:
102219329-102221480
2152
BIRC2_HUMAN
1-299
299
4
A:254-293
B:255-293
C:254-293
D:254-293
40
39
40
40
1.4
ENST00000227758
4
ENSE00001789805
chr11:
102221575-102221674
100
BIRC2_HUMAN
299-332
34
4
A:293-326
B:293-326
C:293-326
D:293-326
34
34
34
34
1.5b
ENST00000227758
5b
ENSE00000930289
chr11:
102233627-102233705
79
BIRC2_HUMAN
332-358
27
4
A:326-352
B:326-352
C:326-352
D:326-352
27
27
27
27
1.6b
ENST00000227758
6b
ENSE00000930290
chr11:
102234399-102234447
49
BIRC2_HUMAN
359-375
17
4
A:353-354
B:353-354
C:353-356
D:353-355
2
2
4
3
1.7
ENST00000227758
7
ENSE00000930291
chr11:
102239037-102239279
243
BIRC2_HUMAN
375-456
82
0
-
-
1.8c
ENST00000227758
8c
ENSE00000930292
chr11:
102248227-102248481
255
BIRC2_HUMAN
456-541
86
0
-
-
1.9
ENST00000227758
9
ENSE00001656578
chr11:
102248588-102248629
42
BIRC2_HUMAN
541-555
15
0
-
-
1.10d
ENST00000227758
10d
ENSE00002160883
chr11:
102248721-102249401
681
BIRC2_HUMAN
555-618
64
0
-
-
[
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3mupa_ (A:)
1b: SCOP_d3mupb_ (B:)
1c: SCOP_d3mupc_ (C:)
1d: SCOP_d3mupd_ (D:)
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Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
Inhibitor of apoptosis (IAP) repeat
(71)
Superfamily
:
Inhibitor of apoptosis (IAP) repeat
(71)
Family
:
Inhibitor of apoptosis (IAP) repeat
(70)
Protein domain
:
automated matches
(24)
Human (Homo sapiens) [TaxId: 9606]
(24)
1a
d3mupa_
A:
1b
d3mupb_
B:
1c
d3mupc_
C:
1d
d3mupd_
D:
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_BIR_3mupD01 (D:266-331)
1b: PFAM_BIR_3mupD02 (D:266-331)
1c: PFAM_BIR_3mupD03 (D:266-331)
1d: PFAM_BIR_3mupD04 (D:266-331)
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Clans
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Organisms
(
)
(
)
Clan
:
BIR-like
(25)
Family
:
BIR
(25)
Homo sapiens (Human)
(24)
1a
BIR-3mupD01
D:266-331
1b
BIR-3mupD02
D:266-331
1c
BIR-3mupD03
D:266-331
1d
BIR-3mupD04
D:266-331
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