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3MQT
Asym. Unit
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Asym.Unit (1.4 MB)
Biol.Unit 1 (495 KB)
Biol.Unit 2 (490 KB)
Biol.Unit 3 (494 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FROM SHEWANELLA PEALEANA
Authors
:
R. Agarwal, S. K. Burley, S. Swaminathan, New York Sgx Research Cen Structural Genomics (Nysgxrc)
Date
:
28 Apr 10 (Deposition) - 12 May 10 (Release) - 09 Feb 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Biol. Unit 2: I,J,K,L,M,N,V,W (1x)
Biol. Unit 3: O,P,Q,R,S,T,U,X (1x)
Keywords
:
Psi-Ii, Nysgxrc, Mandelate Racemase, Muconate Lactonizing Enzyme, Structural Genomics, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Agarwal, S. K. Burley, S. Swaminathan
Crystal Structure Of A Mandelate Racemase/Muconate Lactonizing Enzyme From Shewanella Pealeana
To Be Published
[
close entry info
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Hetero Components
(1, 12)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
1c: MAGNESIUM ION (MGc)
1d: MAGNESIUM ION (MGd)
1e: MAGNESIUM ION (MGe)
1f: MAGNESIUM ION (MGf)
1g: MAGNESIUM ION (MGg)
1h: MAGNESIUM ION (MGh)
1i: MAGNESIUM ION (MGi)
1j: MAGNESIUM ION (MGj)
1k: MAGNESIUM ION (MGk)
1l: MAGNESIUM ION (MGl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MG
12
Ligand/Ion
MAGNESIUM ION
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:206 , GLU A:233 , GLU A:259 , HOH A:446 , HOH A:985
BINDING SITE FOR RESIDUE MG A 1243
02
AC2
SOFTWARE
ASP D:206 , GLU D:233 , GLU D:259 , HOH D:780 , HOH D:1464 , HOH D:1474
BINDING SITE FOR RESIDUE MG D 395
03
AC3
SOFTWARE
ASP E:206 , GLU E:233 , GLU E:259
BINDING SITE FOR RESIDUE MG E 395
04
AC4
SOFTWARE
ASP F:206 , GLU F:233 , GLU F:259 , HOH F:578
BINDING SITE FOR RESIDUE MG F 1460
05
AC5
SOFTWARE
ASP G:206 , GLU G:233 , GLU G:259 , HOH G:1467
BINDING SITE FOR RESIDUE MG G 395
06
AC6
SOFTWARE
ASP H:206 , GLU H:233 , GLU H:259 , HOH H:396 , HOH H:1461 , HOH H:1468
BINDING SITE FOR RESIDUE MG H 626
07
AC7
SOFTWARE
ASP K:206 , GLU K:233 , GLU K:259 , HOH K:396 , HOH K:1466
BINDING SITE FOR RESIDUE MG K 683
08
AC8
SOFTWARE
ASP L:206 , GLU L:233 , GLU L:259 , HOH L:1459
BINDING SITE FOR RESIDUE MG L 395
09
AC9
SOFTWARE
ASP U:206 , GLU U:233 , GLU U:259 , HOH U:397
BINDING SITE FOR RESIDUE MG U 974
10
BC1
SOFTWARE
ASP V:206 , GLU V:233 , GLU V:259 , HOH V:631
BINDING SITE FOR RESIDUE MG V 395
11
BC2
SOFTWARE
ASP W:206 , GLU W:233 , GLU W:259 , HOH W:1462 , HOH W:1478
BINDING SITE FOR RESIDUE MG W 395
12
BC3
SOFTWARE
ASP X:206 , GLU X:233 , GLU X:259
BINDING SITE FOR RESIDUE MG X 1479
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
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Pfam Domains
(3, 72)
Info
all PFAM domains
1a: PFAM_MR_MLE_N_3mqtX01 (X:5-126)
1b: PFAM_MR_MLE_N_3mqtX02 (X:5-126)
1c: PFAM_MR_MLE_N_3mqtX03 (X:5-126)
1d: PFAM_MR_MLE_N_3mqtX04 (X:5-126)
1e: PFAM_MR_MLE_N_3mqtX05 (X:5-126)
1f: PFAM_MR_MLE_N_3mqtX06 (X:5-126)
1g: PFAM_MR_MLE_N_3mqtX07 (X:5-126)
1h: PFAM_MR_MLE_N_3mqtX08 (X:5-126)
1i: PFAM_MR_MLE_N_3mqtX09 (X:5-126)
1j: PFAM_MR_MLE_N_3mqtX10 (X:5-126)
1k: PFAM_MR_MLE_N_3mqtX11 (X:5-126)
1l: PFAM_MR_MLE_N_3mqtX12 (X:5-126)
1m: PFAM_MR_MLE_N_3mqtX13 (X:5-126)
1n: PFAM_MR_MLE_N_3mqtX14 (X:5-126)
1o: PFAM_MR_MLE_N_3mqtX15 (X:5-126)
1p: PFAM_MR_MLE_N_3mqtX16 (X:5-126)
1q: PFAM_MR_MLE_N_3mqtX17 (X:5-126)
1r: PFAM_MR_MLE_N_3mqtX18 (X:5-126)
1s: PFAM_MR_MLE_N_3mqtX19 (X:5-126)
1t: PFAM_MR_MLE_N_3mqtX20 (X:5-126)
1u: PFAM_MR_MLE_N_3mqtX21 (X:5-126)
1v: PFAM_MR_MLE_N_3mqtX22 (X:5-126)
1w: PFAM_MR_MLE_N_3mqtX23 (X:5-126)
1x: PFAM_MR_MLE_N_3mqtX24 (X:5-126)
2a: PFAM_MR_MLE_3mqtX25 (X:189-258)
2b: PFAM_MR_MLE_3mqtX26 (X:189-258)
2c: PFAM_MR_MLE_3mqtX27 (X:189-258)
2d: PFAM_MR_MLE_3mqtX28 (X:189-258)
2e: PFAM_MR_MLE_3mqtX29 (X:189-258)
2f: PFAM_MR_MLE_3mqtX30 (X:189-258)
2g: PFAM_MR_MLE_3mqtX31 (X:189-258)
2h: PFAM_MR_MLE_3mqtX32 (X:189-258)
2i: PFAM_MR_MLE_3mqtX33 (X:189-258)
2j: PFAM_MR_MLE_3mqtX34 (X:189-258)
2k: PFAM_MR_MLE_3mqtX35 (X:189-258)
2l: PFAM_MR_MLE_3mqtX36 (X:189-258)
2m: PFAM_MR_MLE_3mqtX37 (X:189-258)
2n: PFAM_MR_MLE_3mqtX38 (X:189-258)
2o: PFAM_MR_MLE_3mqtX39 (X:189-258)
2p: PFAM_MR_MLE_3mqtX40 (X:189-258)
2q: PFAM_MR_MLE_3mqtX41 (X:189-258)
2r: PFAM_MR_MLE_3mqtX42 (X:189-258)
2s: PFAM_MR_MLE_3mqtX43 (X:189-258)
2t: PFAM_MR_MLE_3mqtX44 (X:189-258)
2u: PFAM_MR_MLE_3mqtX45 (X:189-258)
2v: PFAM_MR_MLE_3mqtX46 (X:189-258)
2w: PFAM_MR_MLE_3mqtX47 (X:189-258)
2x: PFAM_MR_MLE_3mqtX48 (X:189-258)
3a: PFAM_MR_MLE_C_3mqtX49 (X:258-372)
3b: PFAM_MR_MLE_C_3mqtX50 (X:258-372)
3c: PFAM_MR_MLE_C_3mqtX51 (X:258-372)
3d: PFAM_MR_MLE_C_3mqtX52 (X:258-372)
3e: PFAM_MR_MLE_C_3mqtX53 (X:258-372)
3f: PFAM_MR_MLE_C_3mqtX54 (X:258-372)
3g: PFAM_MR_MLE_C_3mqtX55 (X:258-372)
3h: PFAM_MR_MLE_C_3mqtX56 (X:258-372)
3i: PFAM_MR_MLE_C_3mqtX57 (X:258-372)
3j: PFAM_MR_MLE_C_3mqtX58 (X:258-372)
3k: PFAM_MR_MLE_C_3mqtX59 (X:258-372)
3l: PFAM_MR_MLE_C_3mqtX60 (X:258-372)
3m: PFAM_MR_MLE_C_3mqtX61 (X:258-372)
3n: PFAM_MR_MLE_C_3mqtX62 (X:258-372)
3o: PFAM_MR_MLE_C_3mqtX63 (X:258-372)
3p: PFAM_MR_MLE_C_3mqtX64 (X:258-372)
3q: PFAM_MR_MLE_C_3mqtX65 (X:258-372)
3r: PFAM_MR_MLE_C_3mqtX66 (X:258-372)
3s: PFAM_MR_MLE_C_3mqtX67 (X:258-372)
3t: PFAM_MR_MLE_C_3mqtX68 (X:258-372)
3u: PFAM_MR_MLE_C_3mqtX69 (X:258-372)
3v: PFAM_MR_MLE_C_3mqtX70 (X:258-372)
3w: PFAM_MR_MLE_C_3mqtX71 (X:258-372)
3x: PFAM_MR_MLE_C_3mqtX72 (X:258-372)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Enolase_N
(69)
Family
:
MR_MLE_N
(47)
Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
(2)
1a
MR_MLE_N-3mqtX01
X:5-126
1b
MR_MLE_N-3mqtX02
X:5-126
1c
MR_MLE_N-3mqtX03
X:5-126
1d
MR_MLE_N-3mqtX04
X:5-126
1e
MR_MLE_N-3mqtX05
X:5-126
1f
MR_MLE_N-3mqtX06
X:5-126
1g
MR_MLE_N-3mqtX07
X:5-126
1h
MR_MLE_N-3mqtX08
X:5-126
1i
MR_MLE_N-3mqtX09
X:5-126
1j
MR_MLE_N-3mqtX10
X:5-126
1k
MR_MLE_N-3mqtX11
X:5-126
1l
MR_MLE_N-3mqtX12
X:5-126
1m
MR_MLE_N-3mqtX13
X:5-126
1n
MR_MLE_N-3mqtX14
X:5-126
1o
MR_MLE_N-3mqtX15
X:5-126
1p
MR_MLE_N-3mqtX16
X:5-126
1q
MR_MLE_N-3mqtX17
X:5-126
1r
MR_MLE_N-3mqtX18
X:5-126
1s
MR_MLE_N-3mqtX19
X:5-126
1t
MR_MLE_N-3mqtX20
X:5-126
1u
MR_MLE_N-3mqtX21
X:5-126
1v
MR_MLE_N-3mqtX22
X:5-126
1w
MR_MLE_N-3mqtX23
X:5-126
1x
MR_MLE_N-3mqtX24
X:5-126
Clan
:
Enolase_TIM
(82)
Family
:
MR_MLE
(48)
Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
(1)
2a
MR_MLE-3mqtX25
X:189-258
2b
MR_MLE-3mqtX26
X:189-258
2c
MR_MLE-3mqtX27
X:189-258
2d
MR_MLE-3mqtX28
X:189-258
2e
MR_MLE-3mqtX29
X:189-258
2f
MR_MLE-3mqtX30
X:189-258
2g
MR_MLE-3mqtX31
X:189-258
2h
MR_MLE-3mqtX32
X:189-258
2i
MR_MLE-3mqtX33
X:189-258
2j
MR_MLE-3mqtX34
X:189-258
2k
MR_MLE-3mqtX35
X:189-258
2l
MR_MLE-3mqtX36
X:189-258
2m
MR_MLE-3mqtX37
X:189-258
2n
MR_MLE-3mqtX38
X:189-258
2o
MR_MLE-3mqtX39
X:189-258
2p
MR_MLE-3mqtX40
X:189-258
2q
MR_MLE-3mqtX41
X:189-258
2r
MR_MLE-3mqtX42
X:189-258
2s
MR_MLE-3mqtX43
X:189-258
2t
MR_MLE-3mqtX44
X:189-258
2u
MR_MLE-3mqtX45
X:189-258
2v
MR_MLE-3mqtX46
X:189-258
2w
MR_MLE-3mqtX47
X:189-258
2x
MR_MLE-3mqtX48
X:189-258
Family
:
MR_MLE_C
(29)
Shewanella pealeana (strain ATCC 700345 / ANG-SQ1)
(2)
3a
MR_MLE_C-3mqtX49
X:258-372
3b
MR_MLE_C-3mqtX50
X:258-372
3c
MR_MLE_C-3mqtX51
X:258-372
3d
MR_MLE_C-3mqtX52
X:258-372
3e
MR_MLE_C-3mqtX53
X:258-372
3f
MR_MLE_C-3mqtX54
X:258-372
3g
MR_MLE_C-3mqtX55
X:258-372
3h
MR_MLE_C-3mqtX56
X:258-372
3i
MR_MLE_C-3mqtX57
X:258-372
3j
MR_MLE_C-3mqtX58
X:258-372
3k
MR_MLE_C-3mqtX59
X:258-372
3l
MR_MLE_C-3mqtX60
X:258-372
3m
MR_MLE_C-3mqtX61
X:258-372
3n
MR_MLE_C-3mqtX62
X:258-372
3o
MR_MLE_C-3mqtX63
X:258-372
3p
MR_MLE_C-3mqtX64
X:258-372
3q
MR_MLE_C-3mqtX65
X:258-372
3r
MR_MLE_C-3mqtX66
X:258-372
3s
MR_MLE_C-3mqtX67
X:258-372
3t
MR_MLE_C-3mqtX68
X:258-372
3u
MR_MLE_C-3mqtX69
X:258-372
3v
MR_MLE_C-3mqtX70
X:258-372
3w
MR_MLE_C-3mqtX71
X:258-372
3x
MR_MLE_C-3mqtX72
X:258-372
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