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3MQG
Biol. Unit 1
Info
Asym.Unit (226 KB)
Biol.Unit 1 (113 KB)
Biol.Unit 2 (110 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE 3-N-ACETYL TRANSFERASE WLBB FROM BORDETELLA PETRII IN COMPLEX WITH ACETYL-COA
Authors
:
J. B. Thoden, H. M. Holden
Date
:
28 Apr 10 (Deposition) - 12 May 10 (Release) - 16 Jun 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.43
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Beta Helix, Acetyl Transferase, Biosynthesis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. B. Thoden, H. M. Holden
Molecular Structure Of Wlbb, A Bacterial N-Acetyltransferase Involved In The Biosynthesis Of 2, 3-Diacetamido-2, 3-Dideoxy-D-Mannuronic Acid .
Biochemistry V. 49 4644 2010
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Hetero Components
(6, 10)
Info
All Hetero Components
1a: ACETYL COENZYME *A (ACOa)
1b: ACETYL COENZYME *A (ACOb)
1c: ACETYL COENZYME *A (ACOc)
1d: ACETYL COENZYME *A (ACOd)
1e: ACETYL COENZYME *A (ACOe)
1f: ACETYL COENZYME *A (ACOf)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
4a: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)... (PE4a)
5a: PHOSPHATE ION (PO4a)
5b: PHOSPHATE ION (PO4b)
6a: URIDINE-5'-MONOPHOSPHATE (U5Pa)
6b: URIDINE-5'-MONOPHOSPHATE (U5Pb)
6c: URIDINE-5'-MONOPHOSPHATE (U5Pc)
7a: URIDINE-5'-DIPHOSPHATE (UDPa)
7b: URIDINE-5'-DIPHOSPHATE (UDPb)
7c: URIDINE-5'-DIPHOSPHATE (UDPc)
7d: URIDINE-5'-DIPHOSPHATE (UDPd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACO
3
Ligand/Ion
ACETYL COENZYME *A
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
NA
-1
Ligand/Ion
SODIUM ION
4
PE4
1
Ligand/Ion
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL
5
PO4
1
Ligand/Ion
PHOSPHATE ION
6
U5P
1
Ligand/Ion
URIDINE-5'-MONOPHOSPHATE
7
UDP
2
Ligand/Ion
URIDINE-5'-DIPHOSPHATE
[
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:65 , THR A:83 , ASN A:84 , VAL A:85 , TYR A:86 , PRO A:88 , ASN A:134 , PRO A:147 , ARG A:149 , HOH A:199 , HOH A:225 , HOH A:426 , HOH A:1172 , HOH A:1440 , HOH A:1868 , GLN B:59 , PHE B:75 , PRO B:78 , GLY B:110 , ALA B:111 , GLY B:128 , ALA B:129 , ILE B:151 , GLN B:160 , HOH B:195 , HOH B:1280
BINDING SITE FOR RESIDUE ACO A 191
02
AC2
SOFTWARE
TRP A:23 , HIS A:24 , SER A:39 , GLN A:42 , LYS A:57 , GLN A:59 , ASN A:60 , HOH A:448 , HOH A:526 , HOH A:620 , HOH A:1446 , HIS C:27 , PHE C:45 , HOH C:663
BINDING SITE FOR RESIDUE U5P A 192
03
AC3
SOFTWARE
ASN A:112 , HOH A:221 , ASN B:112 , HOH B:223 , ASN C:112 , HOH C:225
BINDING SITE FOR RESIDUE NA A 193
04
AC4
SOFTWARE
TYR B:65 , THR B:83 , ASN B:84 , VAL B:85 , TYR B:86 , ASN B:134 , PRO B:147 , HOH B:201 , HOH B:244 , HOH B:270 , HOH B:308 , HOH B:1341 , HOH B:1357 , HOH B:1423 , HOH B:1893 , PHE C:75 , PRO C:78 , GLY C:110 , ALA C:111 , GLY C:128 , ALA C:129 , VAL C:144 , ILE C:151 , GLN C:160 , HOH C:205
BINDING SITE FOR RESIDUE ACO B 191
05
AC5
SOFTWARE
HIS A:27 , PHE A:45 , ARG B:21 , TRP B:23 , HIS B:24 , SER B:39 , GLN B:42 , LYS B:57 , GLN B:59 , ASN B:60 , HOH B:216 , HOH B:565 , HOH B:595 , HOH B:654 , HOH B:828 , HOH B:1827
BINDING SITE FOR RESIDUE UDP B 192
06
AC6
SOFTWARE
ASN A:112 , GLY A:130 , ASN B:112 , GLY B:130 , ASN C:112 , GLY C:130
BINDING SITE FOR RESIDUE PO4 B 193
07
AC7
SOFTWARE
VAL B:133 , ASN B:134 , LYS B:135 , ASP B:136 , VAL B:137 , ALA B:148 , HOH B:723 , HOH B:962
BINDING SITE FOR RESIDUE EDO B 194
08
AC8
SOFTWARE
PHE A:75 , PRO A:78 , GLY A:110 , ALA A:111 , GLY A:128 , ALA A:129 , ILE A:151 , GLN A:160 , HOH A:210 , TYR C:65 , THR C:83 , ASN C:84 , VAL C:85 , TYR C:86 , PRO C:88 , ASN C:134 , PRO C:147 , ARG C:149 , HOH C:223 , HOH C:397 , HOH C:488 , HOH C:570 , HOH C:1022 , HOH C:1052 , HOH C:1302 , HOH C:1845
BINDING SITE FOR RESIDUE ACO C 191
09
AC9
SOFTWARE
HIS B:27 , PHE B:45 , LYS B:95 , HOH B:646 , ARG C:21 , TRP C:23 , HIS C:24 , SER C:39 , GLN C:42 , GLN C:59 , ASN C:60 , HOH C:213 , HOH C:229 , HOH C:309 , HOH C:342 , HOH C:1051 , HOH C:1208 , HOH C:1474
BINDING SITE FOR RESIDUE UDP C 192
10
BC1
SOFTWARE
GLU C:33 , ARG C:51 , PHE C:69 , LEU C:70 , ILE C:102 , HOH C:655
BINDING SITE FOR RESIDUE PE4 C 193
11
BC2
SOFTWARE
GLY C:35 , ASN C:54 , HOH C:356
BINDING SITE FOR RESIDUE EDO C 194
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 18)
Info
all PFAM domains
1a: PFAM_Hexapep_3mqgF01 (F:100-135)
1b: PFAM_Hexapep_3mqgF02 (F:100-135)
1c: PFAM_Hexapep_3mqgF03 (F:100-135)
1d: PFAM_Hexapep_3mqgF04 (F:100-135)
1e: PFAM_Hexapep_3mqgF05 (F:100-135)
1f: PFAM_Hexapep_3mqgF06 (F:100-135)
1g: PFAM_Hexapep_3mqgF07 (F:100-135)
1h: PFAM_Hexapep_3mqgF08 (F:100-135)
1i: PFAM_Hexapep_3mqgF09 (F:100-135)
1j: PFAM_Hexapep_3mqgF10 (F:100-135)
1k: PFAM_Hexapep_3mqgF11 (F:100-135)
1l: PFAM_Hexapep_3mqgF12 (F:100-135)
1m: PFAM_Hexapep_3mqgF13 (F:100-135)
1n: PFAM_Hexapep_3mqgF14 (F:100-135)
1o: PFAM_Hexapep_3mqgF15 (F:100-135)
1p: PFAM_Hexapep_3mqgF16 (F:100-135)
1q: PFAM_Hexapep_3mqgF17 (F:100-135)
1r: PFAM_Hexapep_3mqgF18 (F:100-135)
View:
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Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Hexapep]
(52)
Family
:
Hexapep
(52)
Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
(1)
1a
Hexapep-3mqgF01
F:100-135
1b
Hexapep-3mqgF02
F:100-135
1c
Hexapep-3mqgF03
F:100-135
1d
Hexapep-3mqgF04
F:100-135
1e
Hexapep-3mqgF05
F:100-135
1f
Hexapep-3mqgF06
F:100-135
1g
Hexapep-3mqgF07
F:100-135
1h
Hexapep-3mqgF08
F:100-135
1i
Hexapep-3mqgF09
F:100-135
1j
Hexapep-3mqgF10
F:100-135
1k
Hexapep-3mqgF11
F:100-135
1l
Hexapep-3mqgF12
F:100-135
1m
Hexapep-3mqgF13
F:100-135
1n
Hexapep-3mqgF14
F:100-135
1o
Hexapep-3mqgF15
F:100-135
1p
Hexapep-3mqgF16
F:100-135
1q
Hexapep-3mqgF17
F:100-135
1r
Hexapep-3mqgF18
F:100-135
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Asymmetric Unit 1
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