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3MOQ
Biol. Unit 3
Info
Asym.Unit (175 KB)
Biol.Unit 1 (45 KB)
Biol.Unit 2 (44 KB)
Biol.Unit 3 (45 KB)
Biol.Unit 4 (45 KB)
Biol.Unit 5 (170 KB)
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(1)
Title
:
AMYLOID BETA(18-41) PEPTIDE FUSION WITH NEW ANTIGEN RECEPTOR VARIABLE DOMAIN FROM SHARKS
Authors
:
V. A. Streltsov
Date
:
23 Apr 10 (Deposition) - 16 Feb 11 (Release) - 21 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: A,B,C,D (1x)
Keywords
:
Ab-Ignar, Ab-12Y-2, Receptor, Amyloid, Glycoprotein, Membrane, Protease Inhibitor, Serine Protease Inhibitor, Transmembrane, Amyloid Beta Fusion With Ignar, Chimera Of Immune System And Amyloid Peptide, Immune System, Neuropeptide
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. A. Streltsov, J. N. Varghese, C. L. Masters, S. D. Nuttall
Crystal Structure Of The Amyloid-{Beta} P3 Fragment Provide A Model For Oligomer Formation In Alzheimer'S Disease
J. Neurosci. V. 31 1419 2011
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(11, 11)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_044424 (D77N, chain C, )
02: VAR_000016 (A91G, chain C, )
03: VAR_014215 (E92G, chain C, )
04: VAR_014216 (E92K, chain C, )
05: VAR_000017 (E92Q, chain C, )
06: VAR_014217 (D93N, chain C, )
07: VAR_032276 (L104V, chain C, )
08: VAR_000019 (G112T, chain C, )
09: VAR_000018 (G112V, chain C, )
10: VAR_032277 (G113A, chain C, )
11: VAR_014218 (G113I, chain C, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_044424
D
678
N
A4_HUMAN
Disease (AD1)
---
C
D
77
N
02
UniProt
VAR_000016
A
692
G
A4_HUMAN
Disease (AD1)
---
C
A
91
G
03
UniProt
VAR_014215
E
693
G
A4_HUMAN
Disease (AD1)
---
C
E
92
G
04
UniProt
VAR_014216
E
693
K
A4_HUMAN
Disease (CAA-APP)
---
C
E
92
K
05
UniProt
VAR_000017
E
693
Q
A4_HUMAN
Disease (CAA-APP)
---
C
E
92
Q
06
UniProt
VAR_014217
D
694
N
A4_HUMAN
Disease (CAA-APP)
---
C
D
93
N
07
UniProt
VAR_032276
L
705
V
A4_HUMAN
Disease (CAA-APP)
---
C
L
104
V
08
UniProt
VAR_000019
A
713
T
A4_HUMAN
Disease (AD1)
---
C
G
112
T
09
UniProt
VAR_000018
A
713
V
A4_HUMAN
Unclassified
1800557
C
G
112
V
10
UniProt
VAR_032277
T
714
A
A4_HUMAN
Disease (AD1)
---
C
G
113
A
11
UniProt
VAR_014218
T
714
I
A4_HUMAN
Disease (AD1)
---
C
G
113
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: BPTI_KUNITZ_2 (C:30-46)
2: BPTI_KUNITZ_1 (C:42-46)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BPTI_KUNITZ_2
PS50279
Pancreatic trypsin inhibitor (Kunitz) family profile.
A4_HUMAN
291-341
1
-
-
C:30-46
-
2
BPTI_KUNITZ_1
PS00280
Pancreatic trypsin inhibitor (Kunitz) family signature.
A4_HUMAN
319-337
1
-
-
C:42-46
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_V_set_3moqD01 (D:1-123)
1b: PFAM_V_set_3moqD02 (D:1-123)
1c: PFAM_V_set_3moqD03 (D:1-123)
1d: PFAM_V_set_3moqD04 (D:1-123)
2a: PFAM_Beta_APP_3moqD05 (D:88-111)
2b: PFAM_Beta_APP_3moqD06 (D:88-111)
2c: PFAM_Beta_APP_3moqD07 (D:88-111)
2d: PFAM_Beta_APP_3moqD08 (D:88-111)
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Clans
(
)
(
)
Families
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)
(
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Organisms
(
)
(
)
Clan
:
Ig
(577)
Family
:
V-set
(144)
Orectolobus maculatus (spotted wobbegong)
(7)
1a
V-set-3moqD01
D:1-123
1b
V-set-3moqD02
D:1-123
1c
V-set-3moqD03
D:1-123
1d
V-set-3moqD04
D:1-123
Clan
:
no clan defined [family: Beta-APP]
(8)
Family
:
Beta-APP
(8)
Homo sapiens (Human)
(7)
2a
Beta-APP-3moqD05
D:88-111
2b
Beta-APP-3moqD06
D:88-111
2c
Beta-APP-3moqD07
D:88-111
2d
Beta-APP-3moqD08
D:88-111
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Chain C
Asymmetric Unit 1
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Asym.Unit (175 KB)
Header - Asym.Unit
Biol.Unit 1 (45 KB)
Header - Biol.Unit 1
Biol.Unit 2 (44 KB)
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Biol.Unit 3 (45 KB)
Header - Biol.Unit 3
Biol.Unit 4 (45 KB)
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Biol.Unit 5 (170 KB)
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