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3MNM
Asym. Unit
Info
Asym.Unit (67 KB)
Biol.Unit 1 (22 KB)
Biol.Unit 2 (22 KB)
Biol.Unit 3 (22 KB)
Biol.Unit 4 (42 KB)
Biol.Unit 5 (41 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GAE DOMAIN OF GGA2P FROM SACCHAROMYCES CEREVISIAE
Authors
:
P. Fang, J. Wang, X. Li, L. Niu, M. Teng
Date
:
21 Apr 10 (Deposition) - 08 Sep 10 (Release) - 05 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.73
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: A,B (1x)
Biol. Unit 5: C (2x)
Keywords
:
Ig-Like, Beta Sandwich, Protein Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
P. Fang, X. Li, J. Wang, L. Niu, M. Teng
Structural Basis For The Specificity Of The Gae Domain Of Ygga2 For Its Accessory Proteins Ent3 And Ent5
Biochemistry V. 49 7949 2010
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Hetero Components
(3, 17)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
2a: N-DIMETHYL-LYSINE (MLYa)
2b: N-DIMETHYL-LYSINE (MLYb)
2c: N-DIMETHYL-LYSINE (MLYc)
2d: N-DIMETHYL-LYSINE (MLYd)
2e: N-DIMETHYL-LYSINE (MLYe)
2f: N-DIMETHYL-LYSINE (MLYf)
2g: N-DIMETHYL-LYSINE (MLYg)
2h: N-DIMETHYL-LYSINE (MLYh)
2i: N-DIMETHYL-LYSINE (MLYi)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
5
Ligand/Ion
GLYCEROL
2
MLY
9
Mod. Amino Acid
N-DIMETHYL-LYSINE
3
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:305 , HOH A:319 , HOH A:323 , MLY A:560 , THR B:572 , GLN B:573
BINDING SITE FOR RESIDUE SO4 A 2
2
AC2
SOFTWARE
HOH A:14 , HOH A:44 , HOH A:72 , ASN A:511 , LEU A:515 , LEU A:516 , TYR A:567 , SER A:568 , GLN A:573 , HOH A:588
BINDING SITE FOR RESIDUE GOL A 1
3
AC3
SOFTWARE
SER A:506 , SER A:507 , PRO A:508 , ILE A:535 , GLY A:536 , HOH A:593 , HOH B:93 , PRO B:508 , PHE B:533 , MLY C:525
BINDING SITE FOR RESIDUE GOL A 586
4
AC4
SOFTWARE
THR A:572 , GLN A:573 , HOH B:131 , HOH B:256 , HOH B:417 , MLY B:560
BINDING SITE FOR RESIDUE SO4 B 1
5
AC5
SOFTWARE
HOH B:270 , ALA B:517 , VAL B:518 , PRO B:519 , MLY B:560 , LYS B:562
BINDING SITE FOR RESIDUE GOL B 3
6
AC6
SOFTWARE
HOH B:135 , ASN B:511 , VAL B:513 , TYR B:567 , SER B:568 , GLN B:573 , HOH B:586 , HOH C:314 , LEU C:516
BINDING SITE FOR RESIDUE GOL B 4
7
AC7
SOFTWARE
HOH C:276 , THR C:572 , GLN C:573 , HOH C:592
BINDING SITE FOR RESIDUE SO4 C 3
8
AC8
SOFTWARE
LEU B:515 , LEU B:516 , ALA B:517 , HOH C:39 , HOH C:84 , HOH C:86 , ASN C:511 , VAL C:513 , TYR C:567 , GLN C:573
BINDING SITE FOR RESIDUE GOL C 2
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Alpha_adaptinC2_3mnmC01 (C:471-583)
1b: PFAM_Alpha_adaptinC2_3mnmC02 (C:471-583)
1c: PFAM_Alpha_adaptinC2_3mnmC03 (C:471-583)
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Clan
:
E-set
(290)
Family
:
Alpha_adaptinC2
(13)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(1)
1a
Alpha_adaptinC2-3mnmC01
C:471-583
1b
Alpha_adaptinC2-3mnmC02
C:471-583
1c
Alpha_adaptinC2-3mnmC03
C:471-583
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Show PDB file:
Asym.Unit (67 KB)
Header - Asym.Unit
Biol.Unit 1 (22 KB)
Header - Biol.Unit 1
Biol.Unit 2 (22 KB)
Header - Biol.Unit 2
Biol.Unit 3 (22 KB)
Header - Biol.Unit 3
Biol.Unit 4 (42 KB)
Header - Biol.Unit 4
Biol.Unit 5 (41 KB)
Header - Biol.Unit 5
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