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3MKA
Asym. Unit
Info
Asym.Unit (1015 KB)
Biol.Unit 1 (1006 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS PROTEASOME WITH PROPETIDE AND AN T1A MUTATION AT BETA-SUBUNIT
Authors
:
D. Li, H. Li
Date
:
14 Apr 10 (Deposition) - 26 May 10 (Release) - 30 Jun 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.51
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2 (1x)
Keywords
:
Mycobacterium Tuberculosis, Proteasome Endopeptidase Complex, Protein Subunits, Propeptide, Protein Maturation, Proteasome Assembly, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Li, H. Li, T. Wang, H. Pan, G. Lin, H. Li
Structural Basis For The Assembly And Gate Closure Mechanisms Of The Mycobacterium Tuberculosis 20S Proteasome.
Embo J. V. 29 2037 2010
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Hetero Components
(0, 0)
Info
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 28)
Info
All PROSITE Patterns/Profiles
1: PROTEASOME_ALPHA_2 (1:16-234,A:16-234,B:16-234,D:16-23...)
2: PROTEASOME_BETA_2 (2:-1-490,C:-1-490,E:-1-490,G:-1-49...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEASOME_ALPHA_2
PS51475
Proteasome alpha-type subunit profile.
PSA_MYCTO
16-234
14
1:16-234
A:16-234
B:16-234
D:16-234
F:16-234
I:16-234
K:16-234
M:16-234
O:16-234
Q:16-234
S:16-234
U:16-234
W:16-234
Y:16-234
PSA_MYCTU
16-234
14
1:16-234
A:16-234
B:16-234
D:16-234
F:16-234
I:16-234
K:16-234
M:16-234
O:16-234
Q:16-234
S:16-234
U:16-234
W:16-234
Y:16-234
2
PROTEASOME_BETA_2
PS51476
Proteasome beta-type subunit profile.
PSB_MYCTO
57-247
14
2:-1-490
C:-1-490
E:-1-490
G:-1-490
H:-1-490
J:-1-490
L:-1-490
N:-1-490
P:-1-490
R:-1-490
T:-1-490
V:-1-490
X:-1-490
Z:-1-490
PSB_MYCTU
57-247
14
2:-1-490
C:-1-490
E:-1-490
G:-1-490
H:-1-490
J:-1-490
L:-1-490
N:-1-490
P:-1-490
R:-1-490
T:-1-490
V:-1-490
X:-1-490
Z:-1-490
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 28)
Info
All SCOP Domains
1a: SCOP_d3mka1_ (1:)
1b: SCOP_d3mka2_ (2:)
1c: SCOP_d3mkaa_ (A:)
1d: SCOP_d3mkab_ (B:)
1e: SCOP_d3mkac_ (C:)
1f: SCOP_d3mkad_ (D:)
1g: SCOP_d3mkae_ (E:)
1h: SCOP_d3mkaf_ (F:)
1i: SCOP_d3mkag_ (G:)
1j: SCOP_d3mkah_ (H:)
1k: SCOP_d3mkai_ (I:)
1l: SCOP_d3mkaj_ (J:)
1m: SCOP_d3mkak_ (K:)
1n: SCOP_d3mkal_ (L:)
1o: SCOP_d3mkam_ (M:)
1p: SCOP_d3mkan_ (N:)
1q: SCOP_d3mkao_ (O:)
1r: SCOP_d3mkap_ (P:)
1s: SCOP_d3mkaq_ (Q:)
1t: SCOP_d3mkar_ (R:)
1u: SCOP_d3mkas_ (S:)
1v: SCOP_d3mkat_ (T:)
1w: SCOP_d3mkau_ (U:)
1x: SCOP_d3mkav_ (V:)
1y: SCOP_d3mkaw_ (W:)
1z: SCOP_d3mkax_ (X:)
1aa: SCOP_d3mkay_ (Y:)
1ab: SCOP_d3mkaz_ (Z:)
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Classes
(
)
(
)
Folds
(
)
(
)
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Proteasome subunits
(222)
Protein domain
:
automated matches
(78)
Mycobacterium tuberculosis [TaxId: 1773]
(9)
1a
d3mka1_
1:
1b
d3mka2_
2:
1c
d3mkaa_
A:
1d
d3mkab_
B:
1e
d3mkac_
C:
1f
d3mkad_
D:
1g
d3mkae_
E:
1h
d3mkaf_
F:
1i
d3mkag_
G:
1j
d3mkah_
H:
1k
d3mkai_
I:
1l
d3mkaj_
J:
1m
d3mkak_
K:
1n
d3mkal_
L:
1o
d3mkam_
M:
1p
d3mkan_
N:
1q
d3mkao_
O:
1r
d3mkap_
P:
1s
d3mkaq_
Q:
1t
d3mkar_
R:
1u
d3mkas_
S:
1v
d3mkat_
T:
1w
d3mkau_
U:
1x
d3mkav_
V:
1y
d3mkaw_
W:
1z
d3mkax_
X:
1aa
d3mkay_
Y:
1ab
d3mkaz_
Z:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(1, 28)
Info
all PFAM domains
1a: PFAM_Proteasome_3mkaY01 (Y:24-206)
1b: PFAM_Proteasome_3mkaY02 (Y:24-206)
1c: PFAM_Proteasome_3mkaY03 (Y:24-206)
1d: PFAM_Proteasome_3mkaY04 (Y:24-206)
1e: PFAM_Proteasome_3mkaY05 (Y:24-206)
1f: PFAM_Proteasome_3mkaY06 (Y:24-206)
1g: PFAM_Proteasome_3mkaY07 (Y:24-206)
1h: PFAM_Proteasome_3mkaY08 (Y:24-206)
1i: PFAM_Proteasome_3mkaY09 (Y:24-206)
1j: PFAM_Proteasome_3mkaY10 (Y:24-206)
1k: PFAM_Proteasome_3mkaY11 (Y:24-206)
1l: PFAM_Proteasome_3mkaY12 (Y:24-206)
1m: PFAM_Proteasome_3mkaY13 (Y:24-206)
1n: PFAM_Proteasome_3mkaY14 (Y:24-206)
1o: PFAM_Proteasome_3mkaZ01 (Z:-3-487)
1p: PFAM_Proteasome_3mkaZ02 (Z:-3-487)
1q: PFAM_Proteasome_3mkaZ03 (Z:-3-487)
1r: PFAM_Proteasome_3mkaZ04 (Z:-3-487)
1s: PFAM_Proteasome_3mkaZ05 (Z:-3-487)
1t: PFAM_Proteasome_3mkaZ06 (Z:-3-487)
1u: PFAM_Proteasome_3mkaZ07 (Z:-3-487)
1v: PFAM_Proteasome_3mkaZ08 (Z:-3-487)
1w: PFAM_Proteasome_3mkaZ09 (Z:-3-487)
1x: PFAM_Proteasome_3mkaZ10 (Z:-3-487)
1y: PFAM_Proteasome_3mkaZ11 (Z:-3-487)
1z: PFAM_Proteasome_3mkaZ12 (Z:-3-487)
1aa: PFAM_Proteasome_3mkaZ13 (Z:-3-487)
1ab: PFAM_Proteasome_3mkaZ14 (Z:-3-487)
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Clans
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)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
NTN
(93)
Family
:
Proteasome
(36)
Mycobacterium tuberculosis
(4)
1a
Proteasome-3mkaY01
Y:24-206
1b
Proteasome-3mkaY02
Y:24-206
1c
Proteasome-3mkaY03
Y:24-206
1d
Proteasome-3mkaY04
Y:24-206
1e
Proteasome-3mkaY05
Y:24-206
1f
Proteasome-3mkaY06
Y:24-206
1g
Proteasome-3mkaY07
Y:24-206
1h
Proteasome-3mkaY08
Y:24-206
1i
Proteasome-3mkaY09
Y:24-206
1j
Proteasome-3mkaY10
Y:24-206
1k
Proteasome-3mkaY11
Y:24-206
1l
Proteasome-3mkaY12
Y:24-206
1m
Proteasome-3mkaY13
Y:24-206
1n
Proteasome-3mkaY14
Y:24-206
1o
Proteasome-3mkaZ01
Z:-3-487
1p
Proteasome-3mkaZ02
Z:-3-487
1q
Proteasome-3mkaZ03
Z:-3-487
1r
Proteasome-3mkaZ04
Z:-3-487
1s
Proteasome-3mkaZ05
Z:-3-487
1t
Proteasome-3mkaZ06
Z:-3-487
1u
Proteasome-3mkaZ07
Z:-3-487
1v
Proteasome-3mkaZ08
Z:-3-487
1w
Proteasome-3mkaZ09
Z:-3-487
1x
Proteasome-3mkaZ10
Z:-3-487
1y
Proteasome-3mkaZ11
Z:-3-487
1z
Proteasome-3mkaZ12
Z:-3-487
1aa
Proteasome-3mkaZ13
Z:-3-487
1ab
Proteasome-3mkaZ14
Z:-3-487
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