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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
3MHR
Asym. Unit
Info
Asym.Unit (108 KB)
Biol.Unit 1 (101 KB)
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(1)
Title
:
14-3-3 SIGMA IN COMPLEX WITH YAP PS127-PEPTIDE
Authors
:
B. Schumacher, M. Skwarczynska, R. Rose, C. Ottmann
Date
:
08 Apr 10 (Deposition) - 15 Sep 10 (Release) - 25 Apr 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.15
Chains
:
Asym. Unit : A,P
Biol. Unit 1: A,P (1x)
Keywords
:
14-3-3, Yap, Adapter Protein, Protein-Protein Interaction, Peptide Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Schumacher, M. Skwarczynska, R. Rose, C. Ottmann
Structure Of A 14-3-3[Sigma]-Yap Phosphopeptide Complex At 1. 15 A Resolution
Acta Crystallogr. , Sect. F V. 66 978 2010
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Hetero Components
(6, 14)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
3a: S-HYDROXYCYSTEINE (CSOa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
6a: PHOSPHOSERINE (SEPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
CL
4
Ligand/Ion
CHLORIDE ION
3
CSO
1
Mod. Amino Acid
S-HYDROXYCYSTEINE
4
GOL
3
Ligand/Ion
GLYCEROL
5
MG
4
Ligand/Ion
MAGNESIUM ION
6
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
[
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]
Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:75 , GLU A:161 , HOH A:276 , HOH A:439 , HOH A:443 , HOH A:453
BINDING SITE FOR RESIDUE MG A 232
02
AC2
SOFTWARE
GLU A:2 , HOH A:252 , HOH A:353
BINDING SITE FOR RESIDUE MG A 233
03
AC3
SOFTWARE
ASP A:215 , LEU A:218 , HOH A:441 , HOH P:214
BINDING SITE FOR RESIDUE MG A 234
04
AC4
SOFTWARE
LYS A:9 , HOH A:384
BINDING SITE FOR RESIDUE CL A 235
05
AC5
SOFTWARE
LYS A:124 , GLU A:153 , HOH A:331 , HOH A:470
BINDING SITE FOR RESIDUE CL A 236
06
AC6
SOFTWARE
TYR A:19 , GLU A:20 , HOH A:278 , HOH A:447
BINDING SITE FOR RESIDUE CL A 237
07
AC7
SOFTWARE
THR A:228 , THR A:231
BINDING SITE FOR RESIDUE CL A 238
08
AC8
SOFTWARE
GLU A:35 , GLU A:110 , GLU A:188 , HOH A:372 , HOH A:386 , HOH A:425
BINDING SITE FOR RESIDUE CA A 239
09
AC9
SOFTWARE
GLN A:8 , LYS A:77 , GLU A:80 , HOH A:283 , HOH A:284 , HOH A:366
BINDING SITE FOR RESIDUE MG A 240
10
BC1
SOFTWARE
GLU A:110 , TYR A:213 , MET A:220 , HOH A:268 , HOH A:289 , HOH A:422
BINDING SITE FOR RESIDUE GOL A 241
11
BC2
SOFTWARE
ASP A:97 , TYR A:128 , HOH A:472
BINDING SITE FOR RESIDUE GOL A 242
12
BC3
SOFTWARE
GLY A:-4 , ALA A:-3 , GLU A:76 , GLY A:78 , PRO A:79 , ARG A:82 , HOH A:350
BINDING SITE FOR RESIDUE GOL A 243
[
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]
SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_048095 (M155I, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_048095
M
155
I
1433S_HUMAN
Polymorphism
11542705
A
M
155
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: 1433_1 (A:41-51)
2: 1433_2 (A:213-231)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
1433_1
PS00796
14-3-3 proteins signature 1.
1433S_HUMAN
41-51
1
A:41-51
2
1433_2
PS00797
14-3-3 proteins signature 2.
1433S_HUMAN
213-232
1
A:213-231
[
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Exons
(2, 2)
Info
All Exons
Exon 1.3 (P:124-133)
Exon 2.1 (A:1-231)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1a/1.3
2: Boundary 1.3/1.4
3: Boundary -/2.1
4: Boundary 2.1/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000282441
1a
ENSE00002151482
chr11:
101981192-101981900
709
YAP1_HUMAN
1-107
107
0
-
-
1.3
ENST00000282441
3
ENSE00001105700
chr11:
101984875-101985125
251
YAP1_HUMAN
108-191
84
1
P:124-133
10
1.4
ENST00000282441
4
ENSE00001105694
chr11:
102033187-102033302
116
YAP1_HUMAN
191-230
40
0
-
-
1.5a
ENST00000282441
5a
ENSE00001311988
chr11:
102056749-102056862
114
YAP1_HUMAN
230-268
39
0
-
-
1.6a
ENST00000282441
6a
ENSE00001292600
chr11:
102076624-102076805
182
YAP1_HUMAN
268-328
61
0
-
-
1.7
ENST00000282441
7
ENSE00001321313
chr11:
102080248-102080295
48
YAP1_HUMAN
329-344
16
0
-
-
1.8
ENST00000282441
8
ENSE00001105702
chr11:
102094353-102094483
131
YAP1_HUMAN
345-388
44
0
-
-
1.10
ENST00000282441
10
ENSE00001105705
chr11:
102098200-102098312
113
YAP1_HUMAN
388-426
39
0
-
-
1.11f
ENST00000282441
11f
ENSE00001345991
chr11:
102100433-102104154
3722
YAP1_HUMAN
426-504
79
0
-
-
2.1
ENST00000339276
1
ENSE00001406083
chr1:
27189653-27190947
1295
1433S_HUMAN
1-265
265
1
A:1-231
231
[
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]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3mhra_ (A:)
View:
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Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
14-3-3 protein
(60)
Family
:
14-3-3 protein
(60)
Protein domain
:
automated matches
(43)
Human (Homo sapiens) [TaxId: 9606]
(38)
1a
d3mhra_
A:
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_14_3_3_3mhrA01 (A:3-231)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: 14-3-3]
(18)
Family
:
14-3-3
(18)
Homo sapiens (Human)
(10)
1a
14-3-3-3mhrA01
A:3-231
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]
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Nucleic
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Protein & NOT PROSITE
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Asymmetric Unit 1
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