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3M8Y
Biol. Unit 1
Info
Asym.Unit (420 KB)
Biol.Unit 1 (140 KB)
Biol.Unit 2 (143 KB)
Biol.Unit 3 (138 KB)
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(1)
Title
:
PHOSPHOPENTOMUTASE FROM BACILLUS CEREUS AFTER GLUCOSE-1,6-BISPHOSPHATE ACTIVATION
Authors
:
T. D. Panosian, D. P. Nannemann, G. Watkins, B. Wadzinski, B. O. Bachman T. M. Iverson
Date
:
19 Mar 10 (Deposition) - 29 Dec 10 (Release) - 23 Mar 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Alkaline Phosphatase Like Core Domain, Di-Metallo Catalytic Center, Manganese Binding, Isomerase, Manganese, Metal-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. D. Panosian, D. P. Nannemann, G. R. Watkins, V. V. Phelan, W. H. Mcdonald, B. E. Wadzinski, B. O. Bachmann, T. M. Iverson
Bacillus Cereus Phosphopentomutase Is An Alkaline Phosphatase Family Member That Exhibits An Altered Entry Point Into The Catalytic Cycle.
J. Biol. Chem. V. 286 8043 2011
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
3c: MANGANESE (II) ION (MNc)
3d: MANGANESE (II) ION (MNd)
3e: MANGANESE (II) ION (MNe)
3f: MANGANESE (II) ION (MNf)
3g: MANGANESE (II) ION (MNg)
3h: MANGANESE (II) ION (MNh)
3i: MANGANESE (II) ION (MNi)
3j: MANGANESE (II) ION (MNj)
4a: PHOSPHOTHREONINE (TPOa)
4b: PHOSPHOTHREONINE (TPOb)
4c: PHOSPHOTHREONINE (TPOc)
5a: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSa)
5b: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
GOL
3
Ligand/Ion
GLYCEROL
3
MN
-1
Ligand/Ion
MANGANESE (II) ION
4
TPO
1
Mod. Amino Acid
PHOSPHOTHREONINE
5
TRS
1
Ligand/Ion
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC8 (SOFTWARE)
11: CC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TPO A:85 , ASP A:156 , ASP A:286 , HIS A:291 , HIS A:339
BINDING SITE FOR RESIDUE MN A 395
02
AC2
SOFTWARE
ASP A:13 , TPO A:85 , ASP A:327 , HIS A:328
BINDING SITE FOR RESIDUE MN A 396
03
AC3
SOFTWARE
GLY A:27 , ASP A:28 , HIS A:334 , HOH A:534 , HOH A:680 , HOH A:681
BINDING SITE FOR RESIDUE MN A 397
04
AC4
SOFTWARE
PRO A:351 , LYS A:354 , HOH A:443 , HOH A:559
BINDING SITE FOR RESIDUE ACT A 398
05
AC5
SOFTWARE
THR A:74 , GLU A:359 , LEU A:360
BINDING SITE FOR RESIDUE ACT A 399
06
AC6
SOFTWARE
GLY A:18 , GLU A:19 , GLY A:30 , SER A:31 , HOH A:451
BINDING SITE FOR RESIDUE GOL A 400
07
AC7
SOFTWARE
LEU A:362 , ARG A:363 , GLN A:364 , ASP A:368 , HOH A:460
BINDING SITE FOR RESIDUE GOL A 401
08
AC8
SOFTWARE
LYS A:3 , GLU A:318 , SER A:352 , HOH A:753
BINDING SITE FOR RESIDUE GOL A 402
09
AC9
SOFTWARE
TYR A:96 , HOH A:567 , HOH A:658
BINDING SITE FOR RESIDUE TRS A 403
10
BC8
SOFTWARE
TYR A:174 , ASN A:211 , HIS A:213 , THR B:120 , GLY B:121 , ARG B:122 , HOH B:682
BINDING SITE FOR RESIDUE GOL B 402
11
CC4
SOFTWARE
GLU A:39 , ASP C:171 , GLU C:172
BINDING SITE FOR RESIDUE ACT C 398
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Info
all CATH domains
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Metalloenzyme_3m8yC01 (C:5-388)
1b: PFAM_Metalloenzyme_3m8yC02 (C:5-388)
1c: PFAM_Metalloenzyme_3m8yC03 (C:5-388)
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Clans
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(
)
Organisms
(
)
(
)
Clan
:
Alk_phosphatase
(47)
Family
:
Metalloenzyme
(7)
Bacillus cereus (strain ATCC 14579 / DSM 31)
(3)
1a
Metalloenzyme-3m8yC01
C:5-388
1b
Metalloenzyme-3m8yC02
C:5-388
1c
Metalloenzyme-3m8yC03
C:5-388
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Chain A
Asymmetric Unit 1
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Asym.Unit (420 KB)
Header - Asym.Unit
Biol.Unit 1 (140 KB)
Header - Biol.Unit 1
Biol.Unit 2 (143 KB)
Header - Biol.Unit 2
Biol.Unit 3 (138 KB)
Header - Biol.Unit 3
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