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3M57
Asym. Unit
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Asym.Unit (52 KB)
Biol.Unit 1 (47 KB)
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(1)
Title
:
SET7/9 Y245A IN COMPLEX WITH TAF10 PEPTIDE AND ADOHCY
Authors
:
P. A. Del Rizzo, J. -F. Couture, M. S. Roiko, B. S. Strunk, J. S. Brunzell L. M. Dirk, R. L. Houtz, R. C. Trievel
Date
:
12 Mar 10 (Deposition) - 28 Jul 10 (Release) - 14 Nov 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ternary Complex, Set Domain, Methyltransferase, S-Adenosyl-L- Homocysteine, Taf10 Peptide, Chromatin Regulator, Chromosomal Protein, Nucleus, S-Adenosyl-L-Methionine, Transcription, Transcription Regulation, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. A. Del Rizzo, J. F. Couture, L. M. Dirk, B. S. Strunk, M. S. Roiko, J. S. Brunzelle, R. L. Houtz, R. C. Trievel
Set7/9 Catalytic Mutants Reveal The Role Of Active Site Water Molecules In Lysine Multiple Methylation.
J. Biol. Chem. V. 285 31849 2010
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: GLYCEROL (GOLa)
3a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
GOL
1
Ligand/Ion
GLYCEROL
3
SAH
1
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:23 , HOH A:82 , ALA A:226 , GLU A:228 , GLY A:264 , ASN A:265 , HIS A:293 , LYS A:294 , ASN A:296 , HIS A:297 , TYR A:335 , TRP A:352 , GLU A:356 , HOH A:408 , HOH A:480
BINDING SITE FOR RESIDUE SAH A 1
2
AC2
SOFTWARE
HOH A:69 , LYS A:168 , LEU A:184 , MET A:185 , PRO A:186 , GLY A:187 , GLN A:253 , GLU A:254 , SER A:257 , HOH A:440 , HOH A:492
BINDING SITE FOR RESIDUE GOL A 2
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SET (A:214-336)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SET
PS50280
SET domain profile.
SETD7_HUMAN
214-336
1
A:214-336
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Exons
(6, 6)
Info
All Exons
Exon 1.4a (A:116-124)
Exon 1.5 (A:125-188)
Exon 1.6 (A:188-215)
Exon 1.7b (A:215-254)
Exon 1.8 (A:255-307)
Exon 1.9 (A:307-364 (gaps))
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All Exon Boundaries
1: Boundary 1.3/1.4a
2: Boundary 1.4a/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.7b
5: Boundary 1.7b/1.8
6: Boundary 1.8/1.9
7: Boundary 1.9/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000274031
1a
ENSE00001831410
chr4:
140477928-140477252
677
SETD7_HUMAN
1-14
14
0
-
-
1.3
ENST00000274031
3
ENSE00001613109
chr4:
140468203-140468074
130
SETD7_HUMAN
14-57
44
0
-
-
1.4a
ENST00000274031
4a
ENSE00001643989
chr4:
140454520-140454319
202
SETD7_HUMAN
57-124
68
1
A:116-124
9
1.5
ENST00000274031
5
ENSE00001671090
chr4:
140450374-140450185
190
SETD7_HUMAN
125-188
64
1
A:125-188
64
1.6
ENST00000274031
6
ENSE00001802218
chr4:
140444589-140444508
82
SETD7_HUMAN
188-215
28
1
A:188-215
28
1.7b
ENST00000274031
7b
ENSE00001663487
chr4:
140441548-140441431
118
SETD7_HUMAN
215-254
40
1
A:215-254
40
1.8
ENST00000274031
8
ENSE00001734092
chr4:
140439196-140439039
158
SETD7_HUMAN
255-307
53
1
A:255-307
53
1.9
ENST00000274031
9
ENSE00001192306
chr4:
140432997-140427190
5808
SETD7_HUMAN
307-366
60
1
A:307-364 (gaps)
58
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (52 KB)
Header - Asym.Unit
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