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3M52
Biol. Unit 1
Info
Asym.Unit (43 KB)
Biol.Unit 1 (38 KB)
Biol.Unit 2 (38 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE BTB DOMAIN FROM THE MIZ-1/ZBTB17 TRANSCRIPTION REGULATOR
Authors
:
P. J. Stogios, J. A. Cuesta-Seijo, L. Chen, G. G. Prive
Date
:
12 Mar 10 (Deposition) - 09 Jun 10 (Release) - 28 Jul 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.59
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Btb Domain, Poz Domain, Btb/Poz Domain, Miz-1, Zinc Finger Protein 151, Myc-Interacting Zinc Finger Protein, Miz-1 Protein, Zfp151, Zfp-151, Znf151, Miz1, Zinc Finger And Btb Domain-Containing Protein 17, Zinc Finger Protein 60, Protein-Protein Interaction Domain, Transcription Regulator, Transcription Activator, Zinc-Finger Protein, Alpha/Beta Protein, Developmental Protein, Dna-Binding, Metal-Binding, Nucleus, Transcription, Transcription Regulation, Zinc-Finger, Dna Binding Protein
(Keyword Search:
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Reference
:
P. J. Stogios, J. A. Cuesta-Seijo, L. Chen, N. C. Pomroy, G. G. Prive
Insights Into Strand Exchange In Btb Domain Dimers From The Crystal Structures Of Fazf And Miz1.
J. Mol. Biol. V. 400 983 2010
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
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No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:6 , HIS A:9 , HOH A:122 , ASP B:103
BINDING SITE FOR RESIDUE ZN A 116
2
AC2
SOFTWARE
HIS A:34 , HOH A:134 , HOH A:138
BINDING SITE FOR RESIDUE ZN A 117
3
AC3
SOFTWARE
ASP A:103 , ACT A:120 , HIS B:6 , HIS B:9
BINDING SITE FOR RESIDUE ZN B 116
4
AC4
SOFTWARE
HIS B:34
BINDING SITE FOR RESIDUE ZN B 117
5
AC5
SOFTWARE
GLU A:87 , LYS B:57 , HIS B:61
BINDING SITE FOR RESIDUE ZN A 118
6
AC6
SOFTWARE
ASP A:55 , ASP A:58 , VAL B:54
BINDING SITE FOR RESIDUE ZN A 119
7
AC7
SOFTWARE
CYS A:45 , PHE A:76 , MET A:101 , GLN A:102 , ASP A:103 , ILE A:104 , HIS B:6 , HIS B:9 , ZN B:116
BINDING SITE FOR RESIDUE ACT A 120
8
AC8
SOFTWARE
GLY A:69 , LEU A:70 , GLY A:71 , GLN A:72
BINDING SITE FOR RESIDUE ACT A 121
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: BTB (A:24-86,B:24-86)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BTB
PS50097
BTB domain profile.
ZBT17_HUMAN
24-86
2
A:24-86
B:24-86
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3m52a_ (A:)
1b: SCOP_d3m52b_ (B:)
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Protein Domains
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
POZ domain
(79)
Superfamily
:
POZ domain
(79)
Family
:
automated matches
(23)
Protein domain
:
automated matches
(23)
Human (Homo sapiens) [TaxId: 9606]
(18)
1a
d3m52a_
A:
1b
d3m52b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_BTB_3m52B01 (B:14-113)
1b: PFAM_BTB_3m52B02 (B:14-113)
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Clan
:
POZ
(36)
Family
:
BTB
(12)
Homo sapiens (Human)
(12)
1a
BTB-3m52B01
B:14-113
1b
BTB-3m52B02
B:14-113
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Asym.Unit (43 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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