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3M3K
Asym. Unit
Info
Asym.Unit (145 KB)
Biol.Unit 1 (94 KB)
Biol.Unit 2 (96 KB)
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(1)
Title
:
LIGAND BINDING DOMAIN (S1S2) OF GLUA3 (FLOP)
Authors
:
A. H. Ahmed, C. P. Ptak, R. E. Oswald
Date
:
09 Mar 10 (Deposition) - 23 Mar 10 (Release) - 26 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.79
Chains
:
Asym. Unit : A,C,E
Biol. Unit 1: A,C (1x)
Biol. Unit 2: E (2x)
Keywords
:
Glutamate Receptor, Glua3, Glur3, Ampa Receptor, Neurotransmitter Receptor, S1S2, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. H. Ahmed, C. P. Ptak, R. E. Oswald
Molecular Mechanism Of Flop Selectivity And Subsite Recognition For An Ampa Receptor Allosteric Modulator: Structures Of Glua2 And Glua3 In Complexes With Pepa.
Biochemistry V. 49 2843 2010
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Hetero Components
(2, 7)
Info
All Hetero Components
1a: GLUTAMIC ACID (GLUa)
1b: GLUTAMIC ACID (GLUb)
1c: GLUTAMIC ACID (GLUc)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GLU
3
Mod. Amino Acid
GLUTAMIC ACID
2
ZN
4
Ligand/Ion
ZINC ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:61 , PRO A:89 , LEU A:90 , THR A:91 , ARG A:96 , LEU A:138 , GLY A:141 , SER A:142 , THR A:143 , GLU A:193 , TYR A:220 , HOH A:509 , HOH A:565 , HOH A:571
BINDING SITE FOR RESIDUE GLU A 400
2
AC2
SOFTWARE
TYR C:61 , PRO C:89 , LEU C:90 , THR C:91 , ARG C:96 , LEU C:138 , GLY C:141 , SER C:142 , THR C:143 , GLU C:193 , TYR C:220 , HOH C:508 , HOH C:534 , HOH C:549
BINDING SITE FOR RESIDUE GLU C 400
3
AC3
SOFTWARE
TYR E:61 , PRO E:89 , LEU E:90 , THR E:91 , ARG E:96 , LEU E:138 , GLY E:141 , SER E:142 , THR E:143 , GLU E:193 , TYR E:220 , HOH E:504 , HOH E:528 , HOH E:586
BINDING SITE FOR RESIDUE GLU E 400
4
AC4
SOFTWARE
GLU A:42 , HIS A:46 , HOH A:500 , GLU E:166
BINDING SITE FOR RESIDUE ZN A 401
5
AC5
SOFTWARE
HIS A:23 , HOH A:561 , ASP C:65
BINDING SITE FOR RESIDUE ZN A 402
6
AC6
SOFTWARE
HIS C:23 , GLU C:24 , HIS E:23 , GLU E:30
BINDING SITE FOR RESIDUE ZN C 401
7
AC7
SOFTWARE
HOH A:508 , GLU E:42 , HIS E:46
BINDING SITE FOR RESIDUE ZN E 401
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d3m3ka_ (A:)
1b: SCOP_d3m3ke_ (E:)
1c: SCOP_d3m3kc_ (C:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Periplasmic binding protein-like II
(813)
Superfamily
:
Periplasmic binding protein-like II
(813)
Family
:
Phosphate binding protein-like
(463)
Protein domain
:
automated matches
(76)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(25)
1a
d3m3ka_
A:
1b
d3m3ke_
E:
1c
d3m3kc_
C:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(2, 6)
Info
all PFAM domains
1a: PFAM_Lig_chan_3m3kE01 (E:119-261)
1b: PFAM_Lig_chan_3m3kE02 (E:119-261)
1c: PFAM_Lig_chan_3m3kE03 (E:119-261)
2a: PFAM_Lig_chan_Glu_bd_3m3kE04 (E:15-80)
2b: PFAM_Lig_chan_Glu_bd_3m3kE05 (E:15-80)
2c: PFAM_Lig_chan_Glu_bd_3m3kE06 (E:15-80)
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Clans
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Families
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Organisms
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)
(
)
Clan
:
Ion_channel
(150)
Family
:
Lig_chan
(109)
Rattus norvegicus (Rat)
(101)
1a
Lig_chan-3m3kE01
E:119-261
1b
Lig_chan-3m3kE02
E:119-261
1c
Lig_chan-3m3kE03
E:119-261
Clan
:
PBP
(391)
Family
:
Lig_chan-Glu_bd
(91)
Rattus norvegicus (Rat)
(86)
2a
Lig_chan-Glu_bd-3m3kE04
E:15-80
2b
Lig_chan-Glu_bd-3m3kE05
E:15-80
2c
Lig_chan-Glu_bd-3m3kE06
E:15-80
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Asymmetric Unit 1
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Asym.Unit (145 KB)
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