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3LXP
Asym. Unit
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Asym.Unit (56 KB)
Biol.Unit 1 (51 KB)
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(1)
Title
:
STRUCTURAL AND THERMODYNAMIC CHARACTERIZATION OF THE TYK2 AND JAK3 KINASE DOMAINS IN COMPLEX WITH CP-690550 AND CMP-6
Authors
:
J. E. Chrencik, T. E. Benson
Date
:
25 Feb 10 (Deposition) - 02 Jun 10 (Release) - 28 Jul 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Tyk2, Jak3, Inflammation, Cancer, Pan Inhibitor, Atp-Binding, Kinase, Nucleotide-Binding, Phosphoprotein, Sh2 Domain, Transferase, Tyrosine-Protein Kinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. E. Chrencik, A. Patny, I. K. Leung, B. Korniski, T. L. Emmons, T. Hall R. A. Weinberg, J. A. Gormley, J. M. Williams, J. E. Day, J. L. Hirsch, J. R. Kiefer, J. W. Leone, H. D. Fischer, C. D. Sommers, H. C. Huang, E. J. Jacobsen, R. E. Tenbrink, A. G. Tomasselli, T. E. Benson
Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6
J. Mol. Biol. V. 400 413 2010
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: 2-TERT-BUTYL-9-FLUORO-3,6-DIHYDRO-... (IZAa)
2a: O-PHOSPHOTYROSINE (PTRa)
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No.
Name
Count
Type
Full Name
1
IZA
1
Ligand/Ion
2-TERT-BUTYL-9-FLUORO-3,6-DIHYDRO-7H-BENZ[H]-IMIDAZ[4,5-F]ISOQUINOLINE-7-ONE
2
PTR
1
Mod. Amino Acid
O-PHOSPHOTYROSINE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:202 , LEU A:903 , GLU A:905 , GLY A:906 , ALA A:928 , MET A:978 , GLU A:979 , TYR A:980 , VAL A:981 , PRO A:982 , GLY A:984 , ARG A:1027 , ASN A:1028 , LEU A:1030
BINDING SITE FOR RESIDUE IZA A 1183
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041873 (A928V, chain A, )
2: VAR_041874 (P1104A, chain A, )
3: VAR_041875 (E1163G, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041873
A
928
V
TYK2_HUMAN
Polymorphism
35018800
A
A
928
V
2
UniProt
VAR_041874
P
1104
A
TYK2_HUMAN
Polymorphism
34536443
A
P
1104
A
3
UniProt
VAR_041875
E
1163
G
TYK2_HUMAN
Polymorphism
55886939
A
E
1163
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:903-930)
2: PROTEIN_KINASE_TYR (A:1019-1031)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
TYK2_HUMAN
903-930
1
A:903-930
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
TYK2_HUMAN
1019-1031
1
A:1019-1031
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
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1a: SCOP_d3lxpa_ (A:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
automated matches
(529)
Protein domain
:
automated matches
(529)
Human (Homo sapiens) [TaxId: 9606]
(438)
1a
d3lxpa_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Pkinase_Tyr_3lxpA01 (A:897-1169)
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Clan
:
PKinase
(934)
Family
:
Pkinase_Tyr
(229)
Homo sapiens (Human)
(202)
1a
Pkinase_Tyr-3lxpA01
A:897-1169
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