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3LX4
Biol. Unit 2
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Asym.Unit (148 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
STEPWISE [FEFE]-HYDROGENASE H-CLUSTER ASSEMBLY REVEALED IN THE STRUCTURE OF HYDA(DELTAEFG)
Authors
:
D. W. Mulder, E. S. Boyd, R. Sarma, R. K. Lange, J. A. Endrizzi, J. B. Brode J. W. Peters
Date
:
24 Feb 10 (Deposition) - 28 Apr 10 (Release) - 26 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.97
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrogenase, Hyda, Hydrogen, H-Cluster, [4Fe-4S] Cluster, Iron-Sulfur Cluster, Insertion, Biosynthesis, Maturation, Intermediate, Evolution, Oxidoreductase
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Reference
:
D. W. Mulder, E. S. Boyd, R. Sarma, R. K. Lange, J. A. Endrizzi, J. B. Broderick, J. W. Peters
Stepwise [Fefe]-Hydrogenase H-Cluster Assembly Revealed In The Structure Of Hyda(Deltaefg).
Nature V. 465 248 2010
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Hetero Components
(2, 2)
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All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: IRON/SULFUR CLUSTER (SF4a)
3b: IRON/SULFUR CLUSTER (SF4b)
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No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
SF4
1
Ligand/Ion
IRON/SULFUR CLUSTER
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Sites
(3, 3)
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1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
CYS B:130 , PRO B:131 , CYS B:185 , ARG B:187 , CYS B:377 , CYS B:381 , GLY B:384 , ACT B:460
BINDING SITE FOR RESIDUE SF4 B 458
2
AC5
SOFTWARE
PRO B:154 , GLN B:155 , LYS B:188 , HOH B:482
BINDING SITE FOR RESIDUE CL B 459
3
AC6
SOFTWARE
CYS B:129 , CYS B:130 , MET B:375 , CYS B:381 , SF4 B:458
BINDING SITE FOR RESIDUE ACT B 460
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Fe_hyd_SSU_3lx4B01 (B:390-449)
1b: PFAM_Fe_hyd_SSU_3lx4B02 (B:390-449)
2a: PFAM_Fe_hyd_lg_C_3lx4B03 (B:45-388)
2b: PFAM_Fe_hyd_lg_C_3lx4B04 (B:45-388)
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Clan
:
no clan defined [family: Fe_hyd_SSU]
(1)
Family
:
Fe_hyd_SSU
(1)
Chlamydomonas reinhardtii (Chlamydomonas smithii)
(1)
1a
Fe_hyd_SSU-3lx4B01
B:390-449
1b
Fe_hyd_SSU-3lx4B02
B:390-449
Clan
:
no clan defined [family: Fe_hyd_lg_C]
(1)
Family
:
Fe_hyd_lg_C
(1)
Chlamydomonas reinhardtii (Chlamydomonas smithii)
(1)
2a
Fe_hyd_lg_C-3lx4B03
B:45-388
2b
Fe_hyd_lg_C-3lx4B04
B:45-388
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Chain B
Asymmetric Unit 1
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Asym.Unit (148 KB)
Header - Asym.Unit
Biol.Unit 1 (72 KB)
Header - Biol.Unit 1
Biol.Unit 2 (73 KB)
Header - Biol.Unit 2
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