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3LU8
Biol. Unit 2
Info
Asym.Unit (191 KB)
Biol.Unit 1 (95 KB)
Biol.Unit 2 (95 KB)
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(1)
Title
:
HUMAN SERUM ALBUMIN IN COMPLEX WITH COMPOUND 3
Authors
:
D. Buttar, N. Colclough, S. Gerhardt, P. A. Macfaul, S. D. Phillips, A. P P. Whittamore, K. Tam, K. Maskos, S. Steinbacher, H. Steuber
Date
:
17 Feb 10 (Deposition) - 27 Oct 10 (Release) - 27 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Binding Sites, Ligands, Protein Binding, Serum Albumin, Hsa, Proteros Biostructures Gmbh, Transport Protein, Astrazeneca, Drug Design
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Buttar, N. Colclough, S. Gerhardt, P. A. Macfaul, S. D. Phillips, A. Plowright, P. Whittamore, K. Tam, K. Maskos, S. Steinbacher, H. Steuber
A Combined Spectroscopic And Crystallographic Approach To Probing Drug-Human Serum Albumin Interactions
Bioorg. Med. Chem. V. 18 7486 2010
[
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: N-[5-(5-{[(2,4-DIMETHYL-1,3-THIAZO... (IQXa)
1b: N-[5-(5-{[(2,4-DIMETHYL-1,3-THIAZO... (IQXb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
IQX
1
Ligand/Ion
N-[5-(5-{[(2,4-DIMETHYL-1,3-THIAZOL-5-YL)SULFONYL]AMINO}-6-FLUOROPYRIDIN-3-YL)-4-METHYL-1,3-THIAZOL-2-YL]ACETAMIDE
[
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Sites
(1, 1)
Info
All Sites
1: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
LEU B:115 , VAL B:116 , ARG B:117 , MET B:123 , TYR B:138 , ILE B:142 , TYR B:161 , LEU B:182 , LEU B:185 , ARG B:186
BINDING SITE FOR RESIDUE IQX B 586
[
close Site info
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SAPs(SNPs)/Variants
(55, 55)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_010657 (F49Y, chain B, )
02: VAR_000507 (E60K, chain B, )
03: VAR_000508 (D63N, chain B, )
04: VAR_013011 (L66P, chain B, )
05: VAR_014290 (E97G, chain B, )
06: VAR_000510 (R114G, chain B, )
07: VAR_000511 (E119K, chain B, )
08: VAR_013012 (V122E, chain B, )
09: VAR_000512 (H128R, chain B, )
10: VAR_000513 (C177F, chain B, )
11: VAR_014291 (A191T, chain B, )
12: VAR_014292 (A191V, chain B, )
13: VAR_014293 (Q196L, chain B, )
14: VAR_000514 (R218H, chain B, )
15: VAR_013013 (R218P, chain B, )
16: VAR_000515 (K225Q, chain B, )
17: VAR_000516 (K240E, chain B, )
18: VAR_000517 (Q268R, chain B, )
19: VAR_000518 (D269G, chain B, )
20: VAR_000519 (K276N, chain B, )
21: VAR_000520 (K313N, chain B, )
22: VAR_013014 (D314G, chain B, )
23: VAR_013015 (D314V, chain B, )
24: VAR_000521 (N318K, chain B, )
25: VAR_000522 (A320T, chain B, )
26: VAR_000523 (E321K, chain B, )
27: VAR_000524 (E333K, chain B, )
28: VAR_000525 (E354K, chain B, )
29: VAR_000526 (E358K, chain B, )
30: VAR_013016 (K359N, chain B, )
31: VAR_000527 (D365H, chain B, )
32: VAR_000528 (D365V, chain B, )
33: VAR_000529 (K372E, chain B, )
34: VAR_000530 (D375N, chain B, )
35: VAR_000531 (E376K, chain B, )
36: VAR_000532 (E376Q, chain B, )
37: VAR_000533 (E382K, chain B, )
38: VAR_014294 (E396K, chain B, )
39: VAR_013017 (R410C, chain B, )
40: VAR_014295 (K466E, chain B, )
41: VAR_000534 (E479K, chain B, )
42: VAR_000535 (D494N, chain B, )
43: VAR_000536 (E501K, chain B, )
44: VAR_000537 (E505K, chain B, )
45: VAR_013018 (V533M, chain B, )
46: VAR_000538 (K536E, chain B, )
47: VAR_000539 (K541E, chain B, )
48: VAR_000541 (D550A, chain B, )
49: VAR_000540 (D550G, chain B, )
50: VAR_013019 (K560E, chain B, )
51: VAR_000542 (D563N, chain B, )
52: VAR_000543 (E565K, chain B, )
53: VAR_000544 (E570K, chain B, )
54: VAR_000545 (K573E, chain B, )
55: VAR_000546 (K574N, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_010657
F
73
Y
ALBU_HUMAN
Polymorphism
---
B
F
49
Y
02
UniProt
VAR_000507
E
84
K
ALBU_HUMAN
Unclassified
---
B
E
60
K
03
UniProt
VAR_000508
D
87
N
ALBU_HUMAN
Unclassified
---
B
D
63
N
04
UniProt
VAR_013011
L
90
P
ALBU_HUMAN
Unclassified
---
B
L
66
P
06
UniProt
VAR_014290
E
121
G
ALBU_HUMAN
Polymorphism
---
B
E
97
G
07
UniProt
VAR_000510
R
138
G
ALBU_HUMAN
Unclassified
---
B
R
114
G
08
UniProt
VAR_000511
E
143
K
ALBU_HUMAN
Unclassified
---
B
E
119
K
09
UniProt
VAR_013012
V
146
E
ALBU_HUMAN
Unclassified
---
B
V
122
E
10
UniProt
VAR_000512
H
152
R
ALBU_HUMAN
Unclassified
---
B
H
128
R
11
UniProt
VAR_000513
C
201
F
ALBU_HUMAN
Unclassified
---
B
C
177
F
12
UniProt
VAR_014291
A
215
T
ALBU_HUMAN
Polymorphism
3210154
B
A
191
T
13
UniProt
VAR_014292
A
215
V
ALBU_HUMAN
Polymorphism
3204504
B
A
191
V
14
UniProt
VAR_014293
Q
220
L
ALBU_HUMAN
Polymorphism
3210163
B
Q
196
L
15
UniProt
VAR_000514
R
242
H
ALBU_HUMAN
Unclassified
---
B
R
218
H
16
UniProt
VAR_013013
R
242
P
ALBU_HUMAN
Unclassified
---
B
R
218
P
17
UniProt
VAR_000515
K
249
Q
ALBU_HUMAN
Unclassified
---
B
K
225
Q
18
UniProt
VAR_000516
K
264
E
ALBU_HUMAN
Unclassified
---
B
K
240
E
19
UniProt
VAR_000517
Q
292
R
ALBU_HUMAN
Unclassified
---
B
Q
268
R
20
UniProt
VAR_000518
D
293
G
ALBU_HUMAN
Unclassified
---
B
D
269
G
21
UniProt
VAR_000519
K
300
N
ALBU_HUMAN
Unclassified
---
B
K
276
N
22
UniProt
VAR_000520
K
337
N
ALBU_HUMAN
Unclassified
---
B
K
313
N
23
UniProt
VAR_013014
D
338
G
ALBU_HUMAN
Unclassified
---
B
D
314
G
24
UniProt
VAR_013015
D
338
V
ALBU_HUMAN
Unclassified
---
B
D
314
V
25
UniProt
VAR_000521
N
342
K
ALBU_HUMAN
Unclassified
---
B
N
318
K
26
UniProt
VAR_000522
A
344
T
ALBU_HUMAN
Unclassified
---
B
A
320
T
27
UniProt
VAR_000523
E
345
K
ALBU_HUMAN
Unclassified
---
B
E
321
K
28
UniProt
VAR_000524
E
357
K
ALBU_HUMAN
Unclassified
---
B
E
333
K
29
UniProt
VAR_000525
E
378
K
ALBU_HUMAN
Unclassified
---
B
E
354
K
30
UniProt
VAR_000526
E
382
K
ALBU_HUMAN
Unclassified
---
B
E
358
K
31
UniProt
VAR_013016
K
383
N
ALBU_HUMAN
Unclassified
---
B
K
359
N
32
UniProt
VAR_000527
D
389
H
ALBU_HUMAN
Unclassified
---
B
D
365
H
33
UniProt
VAR_000528
D
389
V
ALBU_HUMAN
Unclassified
---
B
D
365
V
34
UniProt
VAR_000529
K
396
E
ALBU_HUMAN
Unclassified
---
B
K
372
E
35
UniProt
VAR_000530
D
399
N
ALBU_HUMAN
Unclassified
---
B
D
375
N
36
UniProt
VAR_000531
E
400
K
ALBU_HUMAN
Unclassified
---
B
E
376
K
37
UniProt
VAR_000532
E
400
Q
ALBU_HUMAN
Unclassified
---
B
E
376
Q
38
UniProt
VAR_000533
E
406
K
ALBU_HUMAN
Unclassified
---
B
E
382
K
39
UniProt
VAR_014294
E
420
K
ALBU_HUMAN
Polymorphism
---
B
E
396
K
40
UniProt
VAR_013017
R
434
C
ALBU_HUMAN
Unclassified
---
B
R
410
C
41
UniProt
VAR_014295
K
490
E
ALBU_HUMAN
Polymorphism
1063469
B
K
466
E
42
UniProt
VAR_000534
E
503
K
ALBU_HUMAN
Unclassified
---
B
E
479
K
43
UniProt
VAR_000535
D
518
N
ALBU_HUMAN
Unclassified
---
B
D
494
N
44
UniProt
VAR_000536
E
525
K
ALBU_HUMAN
Unclassified
---
B
E
501
K
45
UniProt
VAR_000537
E
529
K
ALBU_HUMAN
Unclassified
---
B
E
505
K
46
UniProt
VAR_013018
V
557
M
ALBU_HUMAN
Polymorphism
78284052
B
V
533
M
47
UniProt
VAR_000538
K
560
E
ALBU_HUMAN
Unclassified
---
B
K
536
E
48
UniProt
VAR_000539
K
565
E
ALBU_HUMAN
Unclassified
---
B
K
541
E
49
UniProt
VAR_000541
D
574
A
ALBU_HUMAN
Unclassified
---
B
D
550
A
50
UniProt
VAR_000540
D
574
G
ALBU_HUMAN
Unclassified
---
B
D
550
G
51
UniProt
VAR_013019
K
584
E
ALBU_HUMAN
Unclassified
---
B
K
560
E
52
UniProt
VAR_000542
D
587
N
ALBU_HUMAN
Unclassified
---
B
D
563
N
53
UniProt
VAR_000543
E
589
K
ALBU_HUMAN
Unclassified
---
B
E
565
K
54
UniProt
VAR_000544
E
594
K
ALBU_HUMAN
Unclassified
---
B
E
570
K
55
UniProt
VAR_000545
K
597
E
ALBU_HUMAN
Unclassified
---
B
K
573
E
56
UniProt
VAR_000546
K
598
N
ALBU_HUMAN
Unclassified
---
B
K
574
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 5)
Info
All PROSITE Patterns/Profiles
1: ALBUMIN_2 (B:380-577)
2: ALBUMIN_1 (B:551-575)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ALBUMIN_2
PS51438
Albumin domain profile.
ALBU_HUMAN
19-210
211-403
404-601
2
-
-
B:187-379
-
B:380-577
2
ALBUMIN_1
PS00212
Albumin domain signature.
ALBU_HUMAN
185-209
377-401
575-599
3
-
B:161-185
-
B:353-377
-
B:551-575
[
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]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3lu8a1 (A:5-196)
1b: SCOP_d3lu8a2 (A:197-388)
1c: SCOP_d3lu8a3 (A:389-582)
1d: SCOP_d3lu8b1 (B:5-196)
1e: SCOP_d3lu8b2 (B:197-388)
1f: SCOP_d3lu8b3 (B:389-582)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Serum albumin-like
(99)
Superfamily
:
Serum albumin-like
(99)
Family
:
Serum albumin-like
(75)
Protein domain
:
Serum albumin
(69)
Human (Homo sapiens) [TaxId: 9606]
(69)
1a
d3lu8a1
A:5-196
1b
d3lu8a2
A:197-388
1c
d3lu8a3
A:389-582
1d
d3lu8b1
B:5-196
1e
d3lu8b2
B:197-388
1f
d3lu8b3
B:389-582
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_Serum_albumin_3lu8B01 (B:388-568)
1b: PFAM_Serum_albumin_3lu8B02 (B:388-568)
1c: PFAM_Serum_albumin_3lu8B03 (B:388-568)
1d: PFAM_Serum_albumin_3lu8B04 (B:388-568)
1e: PFAM_Serum_albumin_3lu8B05 (B:388-568)
1f: PFAM_Serum_albumin_3lu8B06 (B:388-568)
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Clans
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)
(
)
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(
)
(
)
Organisms
(
)
(
)
Clan
:
Serum_albumin
(23)
Family
:
Serum_albumin
(23)
Homo sapiens (Human)
(22)
1a
Serum_albumin-3lu8B01
B:388-568
1b
Serum_albumin-3lu8B02
B:388-568
1c
Serum_albumin-3lu8B03
B:388-568
1d
Serum_albumin-3lu8B04
B:388-568
1e
Serum_albumin-3lu8B05
B:388-568
1f
Serum_albumin-3lu8B06
B:388-568
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