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3LSK
Asym. Unit
Info
Asym.Unit (787 KB)
Biol.Unit 1 (776 KB)
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(1)
Title
:
PYRANOSE 2-OXIDASE T169S ACETATE COMPLEX
Authors
:
T. C. Tan, O. Spadiut, C. Divne
Date
:
12 Feb 10 (Deposition) - 25 Aug 10 (Release) - 24 Nov 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Oxidoreductase, Gmc Oxidoreductase, T169S Mutant, Acetate Complex, Closed State, Rossmann Fold, Phbh Fold, Homotetramer, Covalently Bound Fad
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. C. Tan, W. Pitsawong, T. Wongnate, O. Spadiut, D. Haltrich, P. Chaiyen, C. Divne
H-Bonding And Positive Charge At The N5/O4 Locus Are Critical For Covalent Flavin Attachment In Trametes Pyranos 2-Oxidase.
J. Mol. Biol. V. 402 578 2010
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: DODECAETHYLENE GLYCOL (12Pa)
1b: DODECAETHYLENE GLYCOL (12Pb)
1c: DODECAETHYLENE GLYCOL (12Pc)
1d: DODECAETHYLENE GLYCOL (12Pd)
1e: DODECAETHYLENE GLYCOL (12Pe)
1f: DODECAETHYLENE GLYCOL (12Pf)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
2d: ACETATE ION (ACTd)
3a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
3b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
3c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
3d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
12P
6
Ligand/Ion
DODECAETHYLENE GLYCOL
2
ACT
4
Ligand/Ion
ACETATE ION
3
FAD
4
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
VAL A:52 , GLY A:53 , GLY A:55 , PRO A:56 , ILE A:57 , ASP A:76 , ILE A:77 , ARG A:159 , VAL A:160 , GLY A:163 , MET A:164 , HIS A:167 , TRP A:168 , SER A:169 , CYS A:170 , ALA A:171 , VAL A:281 , CYS A:283 , THR A:319 , ALA A:320 , HIS A:324 , LEU A:547 , ASN A:593 , THR A:595 , ACT A:901 , HOH A:1035 , HOH A:1040 , HOH A:1069 , HOH A:1086 , HOH A:1144 , HOH A:1205 , HOH A:1215 , HOH A:1467
BINDING SITE FOR RESIDUE FAD A 801
02
AC2
SOFTWARE
SER A:169 , GLN A:448 , PHE A:454 , HIS A:548 , ASN A:593 , FAD A:801 , HOH A:1675
BINDING SITE FOR RESIDUE ACT A 901
03
AC3
SOFTWARE
PRO A:144 , GLU A:145 , PRO A:148 , ARG A:339 , HOH A:1405 , SER C:134
BINDING SITE FOR RESIDUE 12P A 903
04
AC4
SOFTWARE
SER A:134 , HOH A:1808 , HOH A:1970 , PRO C:144 , ASP C:147 , PRO C:148
BINDING SITE FOR RESIDUE 12P A 904
05
AC5
SOFTWARE
VAL B:52 , GLY B:53 , GLY B:55 , PRO B:56 , ILE B:57 , ASP B:76 , ILE B:77 , THR B:158 , ARG B:159 , VAL B:160 , GLY B:163 , MET B:164 , HIS B:167 , TRP B:168 , SER B:169 , CYS B:170 , ALA B:171 , VAL B:281 , CYS B:283 , THR B:319 , ALA B:320 , HIS B:324 , LEU B:547 , ASN B:593 , THR B:595 , ACT B:901 , HOH B:1030 , HOH B:1166 , HOH B:1247 , HOH B:1282 , HOH B:1318 , HOH B:1395 , HOH B:1629
BINDING SITE FOR RESIDUE FAD B 801
06
AC6
SOFTWARE
SER B:169 , GLN B:448 , PHE B:454 , HIS B:548 , ASN B:593 , FAD B:801 , HOH B:2235
BINDING SITE FOR RESIDUE ACT B 901
07
AC7
SOFTWARE
PRO B:144 , GLU B:145 , GLN B:146 , ASP B:147 , PRO B:148 , ARG B:339 , HOH B:1768 , SER D:134 , THR D:135
BINDING SITE FOR RESIDUE 12P B 902
08
AC8
SOFTWARE
VAL C:52 , GLY C:53 , GLY C:55 , PRO C:56 , ILE C:57 , ASP C:76 , ILE C:77 , THR C:158 , ARG C:159 , VAL C:160 , GLY C:163 , MET C:164 , HIS C:167 , TRP C:168 , SER C:169 , CYS C:170 , ALA C:171 , VAL C:281 , CYS C:283 , THR C:319 , ALA C:320 , HIS C:324 , LEU C:547 , ASN C:593 , THR C:595 , ACT C:901 , HOH C:1079 , HOH C:1135 , HOH C:1138 , HOH C:1158 , HOH C:1194 , HOH C:1543 , HOH C:1680 , HOH C:2089
BINDING SITE FOR RESIDUE FAD C 801
09
AC9
SOFTWARE
SER C:169 , GLN C:448 , PHE C:454 , HIS C:548 , ASN C:593 , FAD C:801 , HOH C:2347
BINDING SITE FOR RESIDUE ACT C 901
10
BC1
SOFTWARE
ARG C:288 , ALA C:290 , ASN C:292 , GLY C:333 , GLU C:347
BINDING SITE FOR RESIDUE 12P C 905
11
BC2
SOFTWARE
VAL D:52 , GLY D:53 , GLY D:55 , PRO D:56 , ILE D:57 , ASP D:76 , ILE D:77 , THR D:158 , ARG D:159 , VAL D:160 , GLY D:163 , MET D:164 , HIS D:167 , TRP D:168 , SER D:169 , CYS D:170 , ALA D:171 , VAL D:281 , CYS D:283 , ALA D:320 , HIS D:324 , LEU D:547 , ASN D:593 , THR D:595 , ACT D:901 , HOH D:1114 , HOH D:1146 , HOH D:1549 , HOH D:1653 , HOH D:1769 , HOH D:1824 , HOH D:2316
BINDING SITE FOR RESIDUE FAD D 801
12
BC3
SOFTWARE
SER D:169 , GLN D:448 , PHE D:454 , HIS D:548 , ASN D:593 , FAD D:801
BINDING SITE FOR RESIDUE ACT D 901
13
BC4
SOFTWARE
SER B:134 , PHE B:136 , PRO D:144 , GLU D:145 , GLN D:146 , ASP D:147 , PRO D:148 , HOH D:1807
BINDING SITE FOR RESIDUE 12P D 906
14
BC5
SOFTWARE
ARG D:288 , ASN D:289 , ASN D:292 , GLY D:333 , GLU D:347
BINDING SITE FOR RESIDUE 12P D 907
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_GMC_oxred_C_3lskD01 (D:540-605)
1b: PFAM_GMC_oxred_C_3lskD02 (D:540-605)
1c: PFAM_GMC_oxred_C_3lskD03 (D:540-605)
1d: PFAM_GMC_oxred_C_3lskD04 (D:540-605)
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Clans
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)
(
)
Clan
:
no clan defined [family: GMC_oxred_C]
(22)
Family
:
GMC_oxred_C
(22)
Trametes ochracea (White-rot fungus) (Trametes multicolor)
(13)
1a
GMC_oxred_C-3lskD01
D:540-605
1b
GMC_oxred_C-3lskD02
D:540-605
1c
GMC_oxred_C-3lskD03
D:540-605
1d
GMC_oxred_C-3lskD04
D:540-605
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