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3LSD
Asym. Unit
Info
Asym.Unit (46 KB)
Biol.Unit 1 (41 KB)
Biol.Unit 2 (80 KB)
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(1)
Title
:
N-DOMAIN OF HUMAN ADHESION/GROWTH-REGULATORY GALECTIN-9
Authors
:
F. M. Ruiz, A. Romero
Date
:
12 Feb 10 (Deposition) - 05 May 10 (Release) - 19 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Maninly Beta, Alternative Splicing, Cytoplasm, Lectin, Polymorphism, Secreted, Sugar Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Solis, M. J. Mate, M. Lohr, J. P. Ribeiro, L. Lopez-Merino, S. Andre, E. Buzamet, F. J. Canada, H. Kaltner, M. Lensch, F. M. Ruiz, G. Haroske, U. Wollina, M. Kloor, J. Kopitz, J. L. Saiz, M. Menendez, J. Jimenez-Barbero, A. Romero, H. J. Gabius
N-Domain Of Human Adhesion/Growth-Regulatory Galectin-9: Preference For Distinct Conformers And Non-Sialylated N-Glycans And Detection Of Ligand-Induced Structural Changes In Crystal And Solution.
Int. J. Biochem. Cell Biol. V. 42 1019 2010
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: GALECTIN (A:17-148|-)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GALECTIN
PS51304
Galactoside-binding lectin (galectin) domain profile.
LEG9_HUMAN
17-148
227-355
1
A:17-148
-
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Exons
(4, 4)
Info
All Exons
Exon 1.1a (A:6-13)
Exon 1.2 (A:14-44)
Exon 1.3a (A:44-111)
Exon 1.5 (A:112-148)
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All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.2
3: Boundary 1.2/1.3a
4: Boundary 1.3a/1.5
5: Boundary 1.5/1.6
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000395473
1a
ENSE00002165006
chr17:
25956824-25958330
1507
LEG9_HUMAN
1-13
13
1
A:6-13
8
1.2
ENST00000395473
2
ENSE00001721697
chr17:
25965289-25965380
92
LEG9_HUMAN
14-44
31
1
A:14-44
31
1.3a
ENST00000395473
3a
ENSE00001630948
chr17:
25967598-25967799
202
LEG9_HUMAN
44-111
68
1
A:44-111
68
1.5
ENST00000395473
5
ENSE00001709088
chr17:
25969264-25969374
111
LEG9_HUMAN
112-148
37
1
A:112-148
37
1.6
ENST00000395473
6
ENSE00001727464
chr17:
25970551-25970646
96
LEG9_HUMAN
149-180
32
0
-
-
1.7c
ENST00000395473
7c
ENSE00001611626
chr17:
25972340-25972375
36
LEG9_HUMAN
181-192
12
0
-
-
1.7d
ENST00000395473
7d
ENSE00001697897
chr17:
25972887-25972937
51
LEG9_HUMAN
193-209
17
0
-
-
1.8
ENST00000395473
8
ENSE00001698891
chr17:
25973573-25973614
42
LEG9_HUMAN
210-223
14
0
-
-
1.9a
ENST00000395473
9a
ENSE00001597519
chr17:
25974056-25974144
89
LEG9_HUMAN
224-253
30
0
-
-
1.9c
ENST00000395473
9c
ENSE00001271333
chr17:
25974296-25974458
163
LEG9_HUMAN
253-307
55
0
-
-
1.10f
ENST00000395473
10f
ENSE00001859656
chr17:
25975862-25976586
725
LEG9_HUMAN
308-355
48
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3lsda_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
automated matches
(133)
Protein domain
:
automated matches
(133)
Human (Homo sapiens) [TaxId: 9606]
(36)
1a
d3lsda_
A:
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CATH Domains
(0, 0)
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Gal_bind_lectin_3lsdA01 (A:16-147)
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Clan
:
Concanavalin
(293)
Family
:
Gal-bind_lectin
(60)
Homo sapiens (Human)
(25)
1a
Gal-bind_lectin-3lsdA01
A:16-147
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Asymmetric Unit 1
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