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3LOY
Biol. Unit 1
Info
Asym.Unit (383 KB)
Biol.Unit 1 (251 KB)
Biol.Unit 2 (254 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A COPPER-CONTAINING BENZYLAMINE OXIDASE FROM HANSENULA POLYMORPHA
Authors
:
V. J. Klema, B. J. Johnson, C. M. Wilmot
Date
:
04 Feb 10 (Deposition) - 16 Mar 10 (Release) - 27 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C (2x)
Keywords
:
Amine Oxidase, Tpq, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
C. M. Chang, V. J. Klema, B. J. Johnson, M. Mure, J. P. Klinman, C. M. Wilmot
Kinetic And Structural Analysis Of Substrate Specificity In Two Copper Amine Oxidases From Hansenula Polymorpha.
Biochemistry V. 49 2540 2010
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Hetero Components
(4, 12)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
3a: PHOSPHATE ION (PO4a)
4a: L(+)-TARTARIC ACID (TLAa)
4b: L(+)-TARTARIC ACID (TLAb)
5a: 5-(2-CARBOXY-2-AMINOETHYL)-2-HYDRO... (TPQa)
5b: 5-(2-CARBOXY-2-AMINOETHYL)-2-HYDRO... (TPQb)
5c: 5-(2-CARBOXY-2-AMINOETHYL)-2-HYDRO... (TPQc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CU
-1
Ligand/Ion
COPPER (II) ION
2
GOL
8
Ligand/Ion
GLYCEROL
3
PO4
1
Ligand/Ion
PHOSPHATE ION
4
TLA
1
Ligand/Ion
L(+)-TARTARIC ACID
5
TPQ
2
Mod. Amino Acid
5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:436 , HIS A:438 , HIS A:597 , HOH A:772 , HOH A:1582
BINDING SITE FOR RESIDUE CU A 635
02
AC2
SOFTWARE
LEU A:38 , TYR A:66 , ASN A:554 , TYR A:557 , GLU A:561 , HOH A:682 , HOH A:1437 , HOH A:1587 , HOH A:1595
BINDING SITE FOR RESIDUE GOL A 636
03
AC3
SOFTWARE
ASP A:458 , THR A:478 , GLU A:479 , ARG A:480 , LYS A:513 , HOH A:976 , HOH A:1450 , HOH A:1654 , HOH A:1655
BINDING SITE FOR RESIDUE GOL A 637
04
AC4
SOFTWARE
GLN A:491 , SER A:492 , PRO A:493 , ARG A:497 , TYR A:499 , MET A:521 , GLN A:545 , HOH A:798 , HOH A:1374 , HOH A:2047
BINDING SITE FOR RESIDUE GOL A 638
05
AC5
SOFTWARE
GLN A:351 , ASN A:391 , ARG A:405 , HOH A:837 , HOH A:2061 , HOH A:2301 , HOH A:2614 , HOH B:905
BINDING SITE FOR RESIDUE GOL A 639
06
AC6
SOFTWARE
HIS A:60 , ILE A:61 , SER A:62 , HOH A:866 , HOH A:880 , HOH A:1118 , HOH A:1937 , HOH A:2744 , HIS C:116 , ILE C:118 , LYS C:185 , PHE C:186 , HOH C:839
BINDING SITE FOR RESIDUE TLA A 640
07
AC7
SOFTWARE
HIS B:436 , HIS B:438 , HIS B:597 , HOH B:831 , HOH B:1321
BINDING SITE FOR RESIDUE CU B 635
08
AC8
SOFTWARE
GLN B:491 , SER B:492 , ARG B:497 , TYR B:499 , MET B:521 , GLN B:545 , HOH B:760 , HOH B:1028
BINDING SITE FOR RESIDUE GOL B 636
09
AC9
SOFTWARE
ASP B:458 , THR B:478 , ARG B:480 , LYS B:513 , HOH B:1022 , HOH B:1097 , HOH B:1445 , HOH B:1858 , HOH B:2391 , HOH B:2686
BINDING SITE FOR RESIDUE GOL B 637
10
BC1
SOFTWARE
ASP B:532 , SER B:533 , TYR B:534 , LYS B:537 , HOH B:2875
BINDING SITE FOR RESIDUE PO4 B 638
11
BC2
SOFTWARE
HOH A:827 , GLN B:351 , VAL B:376 , GLN B:378 , ASN B:391 , ILE B:393 , ARG B:405 , HOH B:732 , HOH B:2035 , HOH B:2206 , HOH B:2313
BINDING SITE FOR RESIDUE GOL B 639
12
BC3
SOFTWARE
ARG A:462 , PHE A:494 , HOH A:2039 , MET B:526 , LEU B:527 , LEU B:528 , HOH B:842 , HOH B:1176
BINDING SITE FOR RESIDUE GOL B 640
13
BC6
SOFTWARE
HIS B:116 , ILE B:118 , LYS B:185 , PHE B:186 , HOH B:1220 , HOH B:1890 , HIS C:60 , ILE C:61 , SER C:62 , HOH C:730 , HOH C:833 , HOH C:1263 , HOH C:1754 , HOH C:1884
BINDING SITE FOR RESIDUE TLA C 637
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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Asymmetric Unit 1
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Asym.Unit (383 KB)
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Biol.Unit 1 (251 KB)
Header - Biol.Unit 1
Biol.Unit 2 (254 KB)
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