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3LNM
Biol. Unit 2
Info
Asym.Unit (242 KB)
Biol.Unit 1 (429 KB)
Biol.Unit 2 (483 KB)
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(1)
Title
:
F233W MUTANT OF THE KV2.1 PADDLE-KV1.2 CHIMERA CHANNEL
Authors
:
X. Tao, A. Lee, W. Limapichat, D. A. Dougherty, R. Mackinnon
Date
:
02 Feb 10 (Deposition) - 14 Apr 10 (Release) - 14 Apr 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (4x)
Biol. Unit 2: B,C (4x)
Keywords
:
Voltage-Gated Potassium Channel-Beta Subunit Complex, Acetylation, Cytoplasm, Ion Transport, Ionic Channel, Nadp, Phosphoprotein, Potassium, Potassium Transport, Transport, Voltage-Gated Channel, Glycoprotein, Lipoprotein, Membrane, Palmitate, Potassium Channel, Transmembrane, Membrane Protein, Transport Protein
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Reference
:
X. Tao, A. Lee, W. Limapichat, D. A. Dougherty, R. Mackinnon
A Gating Charge Transfer Center In Voltage Sensors.
Science V. 328 67 2010
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Hetero Components
(2, 52)
Info
All Hetero Components
1a: POTASSIUM ION (Ka)
1b: POTASSIUM ION (Kb)
1c: POTASSIUM ION (Kc)
1d: POTASSIUM ION (Kd)
1e: POTASSIUM ION (Ke)
1f: POTASSIUM ION (Kf)
1g: POTASSIUM ION (Kg)
1h: POTASSIUM ION (Kh)
1i: POTASSIUM ION (Ki)
1j: POTASSIUM ION (Kj)
2a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
2b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3a: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWa)
3b: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWb)
3c: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWc)
3d: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWd)
3e: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWe)
3f: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWf)
3g: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWg)
3h: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWh)
3i: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWi)
3j: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWj)
3k: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWk)
3l: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWl)
3m: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWm)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
K
-1
Ligand/Ion
POTASSIUM ION
2
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
3
PGW
48
Ligand/Ion
(1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(HEXADECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
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Sites
(14, 14)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC3 (SOFTWARE)
03: AC4 (SOFTWARE)
04: AC5 (SOFTWARE)
05: AC6 (SOFTWARE)
06: AC7 (SOFTWARE)
07: AC8 (SOFTWARE)
08: AC9 (SOFTWARE)
09: BC1 (SOFTWARE)
10: BC2 (SOFTWARE)
11: BC3 (SOFTWARE)
12: BC4 (SOFTWARE)
13: BC5 (SOFTWARE)
14: BC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
ILE B:328 , PRO B:358 , PHE B:361 , TRP B:362 , LYS B:384 , SER B:388 , PGW B:605
BINDING SITE FOR RESIDUE PGW B 601
02
AC3
SOFTWARE
HOH B:2130
BINDING SITE FOR RESIDUE PGW B 602
03
AC4
SOFTWARE
VAL B:178 , PGW B:601
BINDING SITE FOR RESIDUE PGW B 605
04
AC5
SOFTWARE
THR B:397 , PGW B:609
BINDING SITE FOR RESIDUE PGW B 606
05
AC6
SOFTWARE
SER B:307 , LYS B:308 , GLY B:309 , ARG B:322 , LEU B:326 , PHE B:329
BINDING SITE FOR RESIDUE PGW B 608
06
AC7
SOFTWARE
PHE B:330 , THR B:397 , PGW B:606
BINDING SITE FOR RESIDUE PGW B 609
07
AC8
SOFTWARE
ILE B:254 , MET B:255 , LYS B:308 , GLN B:311 , GLY B:314 , GLN B:315 , LYS B:318 , ARG B:415
BINDING SITE FOR RESIDUE PGW B 610
08
AC9
SOFTWARE
GLN B:214 , SER B:215 , THR B:216 , ILE B:231
BINDING SITE FOR RESIDUE PGW B 611
09
BC1
SOFTWARE
PHE B:218
BINDING SITE FOR RESIDUE PGW B 612
10
BC2
SOFTWARE
GLY B:372 , TYR B:373
BINDING SITE FOR RESIDUE K B 501
11
BC3
SOFTWARE
VAL B:371 , GLY B:372 , K B:503
BINDING SITE FOR RESIDUE K B 502
12
BC4
SOFTWARE
THR B:370 , VAL B:371 , K B:502
BINDING SITE FOR RESIDUE K B 503
13
BC5
SOFTWARE
THR B:370
BINDING SITE FOR RESIDUE K B 504
14
BC6
SOFTWARE
GLY C:55 , THR C:56 , TRP C:57 , GLN C:63 , ASP C:85 , TYR C:90 , ASN C:158 , SER C:188 , ARG C:189 , GLN C:214 , TRP C:243 , SER C:244 , PRO C:245 , LEU C:246 , ALA C:247 , CYS C:248 , GLY C:249 , SER C:252 , LYS C:254 , TYR C:262 , SER C:263 , ARG C:264 , LEU C:321 , GLY C:323 , SER C:325 , GLN C:329 , GLU C:332 , ASN C:333 , HOH C:2028 , HOH C:2038
BINDING SITE FOR RESIDUE NAP C 1001
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3lnma_ (A:)
1b: SCOP_d3lnmc_ (C:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
Aldo-keto reductases (NADP)
(251)
Protein domain
:
Voltage-dependent K+ channel beta subunit
(11)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(11)
1a
d3lnma_
A:
1b
d3lnmc_
C:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_Ion_trans_3lnmD01 (D:224-405)
1b: PFAM_Ion_trans_3lnmD02 (D:224-405)
2a: PFAM_K_tetra_3lnmD03 (D:35-126)
2b: PFAM_K_tetra_3lnmD04 (D:35-126)
3a: PFAM_Aldo_ket_red_3lnmC01 (C:51-356)
3b: PFAM_Aldo_ket_red_3lnmC02 (C:51-356)
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Clans
(
)
(
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Families
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(
)
Organisms
(
)
(
)
Clan
:
Ion_channel
(150)
Family
:
Ion_trans
(5)
Rattus norvegicus (Rat)
(3)
1a
Ion_trans-3lnmD01
D:224-405
1b
Ion_trans-3lnmD02
D:224-405
Clan
:
POZ
(36)
Family
:
K_tetra
(6)
Rattus norvegicus (Rat)
(4)
2a
K_tetra-3lnmD03
D:35-126
2b
K_tetra-3lnmD04
D:35-126
Clan
:
no clan defined [family: Aldo_ket_red]
(94)
Family
:
Aldo_ket_red
(94)
Rattus norvegicus (Rat)
(6)
3a
Aldo_ket_red-3lnmC01
C:51-356
3b
Aldo_ket_red-3lnmC02
C:51-356
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Asym.Unit (242 KB)
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