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3LNM
Biol. Unit 1
Info
Asym.Unit (242 KB)
Biol.Unit 1 (429 KB)
Biol.Unit 2 (483 KB)
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(1)
Title
:
F233W MUTANT OF THE KV2.1 PADDLE-KV1.2 CHIMERA CHANNEL
Authors
:
X. Tao, A. Lee, W. Limapichat, D. A. Dougherty, R. Mackinnon
Date
:
02 Feb 10 (Deposition) - 14 Apr 10 (Release) - 14 Apr 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (4x)
Biol. Unit 2: B,C (4x)
Keywords
:
Voltage-Gated Potassium Channel-Beta Subunit Complex, Acetylation, Cytoplasm, Ion Transport, Ionic Channel, Nadp, Phosphoprotein, Potassium, Potassium Transport, Transport, Voltage-Gated Channel, Glycoprotein, Lipoprotein, Membrane, Palmitate, Potassium Channel, Transmembrane, Membrane Protein, Transport Protein
(Keyword Search:
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Reference
:
X. Tao, A. Lee, W. Limapichat, D. A. Dougherty, R. Mackinnon
A Gating Charge Transfer Center In Voltage Sensors.
Science V. 328 67 2010
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: POTASSIUM ION (Ka)
1b: POTASSIUM ION (Kb)
1c: POTASSIUM ION (Kc)
1d: POTASSIUM ION (Kd)
1e: POTASSIUM ION (Ke)
1f: POTASSIUM ION (Kf)
1g: POTASSIUM ION (Kg)
1h: POTASSIUM ION (Kh)
1i: POTASSIUM ION (Ki)
1j: POTASSIUM ION (Kj)
2a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
2b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3a: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWa)
3b: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWb)
3c: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWc)
3d: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWd)
3e: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWe)
3f: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWf)
3g: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWg)
3h: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWh)
3i: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWi)
3j: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWj)
3k: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWk)
3l: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWl)
3m: (1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYP... (PGWm)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
K
-1
Ligand/Ion
POTASSIUM ION
2
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
3
PGW
-1
Ligand/Ion
(1R)-2-{[(S)-{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(HEXADECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: BC7 (SOFTWARE)
3: BC8 (SOFTWARE)
4: BC9 (SOFTWARE)
5: CC1 (SOFTWARE)
6: CC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:55 , THR A:56 , TRP A:57 , GLN A:63 , ASP A:85 , TYR A:90 , LYS A:118 , ASN A:158 , SER A:188 , ARG A:189 , GLN A:214 , TRP A:243 , SER A:244 , PRO A:245 , LEU A:246 , ALA A:247 , CYS A:248 , GLY A:249 , LYS A:254 , SER A:263 , ARG A:264 , LEU A:321 , GLY A:323 , SER A:325 , GLN A:329 , GLU A:332 , ASN A:333 , HOH A:2036
BINDING SITE FOR RESIDUE NAP A 1001
2
BC7
SOFTWARE
PRO D:358 , PHE D:361 , TRP D:362 , VAL D:365 , ILE D:381 , LYS D:384 , SER D:388
BINDING SITE FOR RESIDUE PGW D 601
3
BC8
SOFTWARE
GLY D:372 , TYR D:373 , K D:502
BINDING SITE FOR RESIDUE K D 501
4
BC9
SOFTWARE
VAL D:371 , GLY D:372 , K D:501
BINDING SITE FOR RESIDUE K D 502
5
CC1
SOFTWARE
THR D:370 , VAL D:371 , K D:504
BINDING SITE FOR RESIDUE K D 503
6
CC2
SOFTWARE
THR D:370 , K D:503
BINDING SITE FOR RESIDUE K D 504
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3lnma_ (A:)
1b: SCOP_d3lnmc_ (C:)
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Protein Domains
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)
(
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Organisms
(
)
(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
NAD(P)-linked oxidoreductase
(286)
Family
:
Aldo-keto reductases (NADP)
(251)
Protein domain
:
Voltage-dependent K+ channel beta subunit
(11)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(11)
1a
d3lnma_
A:
1b
d3lnmc_
C:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_Ion_trans_3lnmD01 (D:224-405)
1b: PFAM_Ion_trans_3lnmD02 (D:224-405)
2a: PFAM_K_tetra_3lnmD03 (D:35-126)
2b: PFAM_K_tetra_3lnmD04 (D:35-126)
3a: PFAM_Aldo_ket_red_3lnmC01 (C:51-356)
3b: PFAM_Aldo_ket_red_3lnmC02 (C:51-356)
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Clans
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Organisms
(
)
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)
Clan
:
Ion_channel
(150)
Family
:
Ion_trans
(5)
Rattus norvegicus (Rat)
(3)
1a
Ion_trans-3lnmD01
D:224-405
1b
Ion_trans-3lnmD02
D:224-405
Clan
:
POZ
(36)
Family
:
K_tetra
(6)
Rattus norvegicus (Rat)
(4)
2a
K_tetra-3lnmD03
D:35-126
2b
K_tetra-3lnmD04
D:35-126
Clan
:
no clan defined [family: Aldo_ket_red]
(94)
Family
:
Aldo_ket_red
(94)
Rattus norvegicus (Rat)
(6)
3a
Aldo_ket_red-3lnmC01
C:51-356
3b
Aldo_ket_red-3lnmC02
C:51-356
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Show PDB file:
Asym.Unit (242 KB)
Header - Asym.Unit
Biol.Unit 1 (429 KB)
Header - Biol.Unit 1
Biol.Unit 2 (483 KB)
Header - Biol.Unit 2
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