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3LK3
Asym. Unit
Info
Asym.Unit (193 KB)
Biol.Unit 1 (188 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CAPZ BOUND TO THE CPI AND CSI UNCAPPING MOTIFS FROM CARMIL
Authors
:
M. Hernandez-Valladares, T. Kim, B. Kannan, A. Tung, J. A. Cooper, R. C. Robinson
Date
:
27 Jan 10 (Deposition) - 07 Apr 10 (Release) - 07 Apr 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.68
Chains
:
Asym. Unit : A,B,T
Biol. Unit 1: A,B,T (1x)
Keywords
:
Capz, Carmil, Actin Filaments, Uncapping, Actin-Filament Regulators, Protein-Protein Complex, Actin Capping, Actin- Binding, Cytoplasm, Cytoskeleton, Protein Binding
(Keyword Search:
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Reference
:
M. Hernandez-Valladares, T. Kim, B. Kannan, A. Tung, A. H. Aguda, M. Larrson, J. A. Cooper, R. C. Robinson
Structural Characterization Of A Capping Protein Interaction Motif Defines A Family Of Actin Filament Regulators
Nat. Struct. Mol. Biol. 2010
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_CAZA1_CHICK_001 (F163I, chain A, )
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_CAZA1_CHICK_001
*
F
163
I
CAZA1_CHICK
---
---
A
F
163
I
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: F_ACTIN_CAPPING_BETA (B:62-67)
2: F_ACTIN_CAPPING_A_1 (A:196-204)
3: F_ACTIN_CAPPING_A_2 (A:256-266)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
F_ACTIN_CAPPING_BETA
PS00231
F-actin capping protein beta subunit signature.
CAPZB_CHICK
62-67
1
B:62-67
2
F_ACTIN_CAPPING_A_1
PS00748
F-actin capping protein alpha subunit signature 1.
CAZA1_CHICK
196-204
1
A:196-204
3
F_ACTIN_CAPPING_A_2
PS00749
F-actin capping protein alpha subunit signature 2.
CAZA1_CHICK
256-266
1
A:256-266
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Exons
(8, 8)
Info
All Exons
Exon 1.2a (B:2-30)
Exon 1.3 (B:31-71)
Exon 1.4 (B:71-109)
Exon 1.5 (B:109-156)
Exon 1.6 (B:157-195)
Exon 1.7 (B:196-217)
Exon 1.8 (B:218-243)
Exon 1.9 (B:243-250)
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All Exon Boundaries
1: Boundary -/1.2a
2: Boundary 1.2a/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/1.8
8: Boundary 1.8/1.9
9: Boundary 1.9/1.10a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENSGALT00000006425
2a
ENSGALE00000042043
chr21:
4747591-4747501
91
CAPZB_CHICK
1-30
30
1
B:2-30
29
1.3
ENSGALT00000006425
3
ENSGALE00000042051
chr21:
4734482-4734361
122
CAPZB_CHICK
31-71
41
1
B:31-71
41
1.4
ENSGALT00000006425
4
ENSGALE00000042045
chr21:
4723866-4723753
114
CAPZB_CHICK
71-109
39
1
B:71-109
39
1.5
ENSGALT00000006425
5
ENSGALE00000042044
chr21:
4709816-4709675
142
CAPZB_CHICK
109-156
48
1
B:109-156
48
1.6
ENSGALT00000006425
6
ENSGALE00000042049
chr21:
4709146-4709030
117
CAPZB_CHICK
157-195
39
1
B:157-195
39
1.7
ENSGALT00000006425
7
ENSGALE00000042042
chr21:
4702101-4702036
66
CAPZB_CHICK
196-217
22
1
B:196-217
22
1.8
ENSGALT00000006425
8
ENSGALE00000042048
chr21:
4701227-4701151
77
CAPZB_CHICK
218-243
26
1
B:218-243
26
1.9
ENSGALT00000006425
9
ENSGALE00000042047
chr21:
4699862-4699750
113
CAPZB_CHICK
243-276
34
1
B:243-250
8
1.10a
ENSGALT00000006425
10a
ENSGALE00000042050
chr21:
4697971-4697725
247
CAPZB_CHICK
-
0
0
-
-
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3lk3a_ (A:)
2a: SCOP_d3lk3b_ (B:)
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Protein Domains
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(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Subunits of heterodimeric actin filament capping protein Capz
(18)
Superfamily
:
Subunits of heterodimeric actin filament capping protein Capz
(18)
Family
:
Capz alpha-1 subunit
(10)
Protein domain
:
Capz alpha-1 subunit
(10)
Chicken (Gallus gallus) [TaxId: 9031]
(10)
1a
d3lk3a_
A:
Family
:
Capz beta-1 subunit
(7)
Protein domain
:
Capz beta-1 subunit
(6)
Chicken (Gallus gallus) [TaxId: 9031]
(6)
2a
d3lk3b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_F_actin_cap_A_3lk3A01 (A:12-276)
2a: PFAM_F_actin_cap_B_3lk3B01 (B:5-240)
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Clan
:
no clan defined [family: F-actin_cap_A]
(8)
Family
:
F-actin_cap_A
(8)
Gallus gallus (Chicken)
(5)
1a
F-actin_cap_A-3lk3A01
A:12-276
Clan
:
no clan defined [family: F_actin_cap_B]
(5)
Family
:
F_actin_cap_B
(5)
Gallus gallus (Chicken)
(5)
2a
F_actin_cap_B-3lk3B01
B:5-240
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Asym.Unit (193 KB)
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