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3LGE
Asym. Unit
Info
Asym.Unit (525 KB)
Biol.Unit 1 (519 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RABBIT MUSCLE ALDOLASE-SNX9 LC4 COMPLEX
Authors
:
E. S. Rangarajan, H. Park, E. Fortin, J. Sygusch, T. Izard
Date
:
20 Jan 10 (Deposition) - 02 Feb 10 (Release) - 26 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Keywords
:
Complex, Glycolysis, Actin Dynamics, Lc4, Hydrophobic Pocket, Acetylation, Lyase, Phosphoprotein, Schiff Base, Protein Transport, Sh3 Domain, Transport, Lyase-Protein Binding Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
E. S. Rangarajan, H. Park, E. Fortin, J. Sygusch, T. Izard
Mechanism Of Aldolase Control Of Sorting Nexin 9 Function In Endocytosis.
J. Biol. Chem. V. 285 11983 2010
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: ALDOLASE_CLASS_I (A:221-231,B:221-231,C:221-231,D:22...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ALDOLASE_CLASS_I
PS00158
Fructose-bisphosphate aldolase class-I active site.
ALDOA_RABIT
222-232
4
A:221-231
B:221-231
C:221-231
D:221-231
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Exons
(1, 4)
Info
All Exons
Exon 1.6 (E:165-171 | F:164-182 | G:164-182 ...)
View:
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000392185
1
ENSE00001381139
chr6:
158244296-158244478
183
SNX9_HUMAN
1-4
4
0
-
-
1.2
ENST00000392185
2
ENSE00001434680
chr6:
158288579-158288665
87
SNX9_HUMAN
5-33
29
0
-
-
1.3
ENST00000392185
3
ENSE00000894254
chr6:
158294134-158294208
75
SNX9_HUMAN
34-58
25
0
-
-
1.4
ENST00000392185
4
ENSE00000894253
chr6:
158296083-158296208
126
SNX9_HUMAN
59-100
42
0
-
-
1.5
ENST00000392185
5
ENSE00000894252
chr6:
158317859-158318030
172
SNX9_HUMAN
101-158
58
0
-
-
1.6
ENST00000392185
6
ENSE00000894251
chr6:
158322930-158323077
148
SNX9_HUMAN
158-207
50
4
E:165-171
F:164-182
G:164-182
H:165-171
7
19
19
7
1.7
ENST00000392185
7
ENSE00000894250
chr6:
158327160-158327244
85
SNX9_HUMAN
207-235
29
0
-
-
1.8
ENST00000392185
8
ENSE00000894249
chr6:
158330697-158330822
126
SNX9_HUMAN
236-277
42
0
-
-
1.9
ENST00000392185
9
ENSE00000894248
chr6:
158330940-158331057
118
SNX9_HUMAN
278-317
40
0
-
-
1.10
ENST00000392185
10
ENSE00000894247
chr6:
158342563-158342693
131
SNX9_HUMAN
317-360
44
0
-
-
1.11
ENST00000392185
11
ENSE00000894246
chr6:
158348143-158348246
104
SNX9_HUMAN
361-395
35
0
-
-
1.12
ENST00000392185
12
ENSE00000894245
chr6:
158349631-158349734
104
SNX9_HUMAN
395-430
36
0
-
-
1.13
ENST00000392185
13
ENSE00000894244
chr6:
158353227-158353304
78
SNX9_HUMAN
430-456
27
0
-
-
1.14
ENST00000392185
14
ENSE00000894243
chr6:
158356996-158357072
77
SNX9_HUMAN
456-481
26
0
-
-
1.15
ENST00000392185
15
ENSE00001218186
chr6:
158358466-158358555
90
SNX9_HUMAN
482-511
30
0
-
-
1.16
ENST00000392185
16
ENSE00001218176
chr6:
158359665-158359779
115
SNX9_HUMAN
512-550
39
0
-
-
1.17
ENST00000392185
17
ENSE00000830242
chr6:
158361915-158362006
92
SNX9_HUMAN
550-580
31
0
-
-
1.18
ENST00000392185
18
ENSE00001139578
chr6:
158363823-158366109
2287
SNX9_HUMAN
581-595
15
0
-
-
[
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3lgea_ (A:)
1b: SCOP_d3lgeb_ (B:)
1c: SCOP_d3lgec_ (C:)
1d: SCOP_d3lged_ (D:)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
Class I aldolase
(182)
Protein domain
:
Fructose-1,6-bisphosphate aldolase
(39)
Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
(25)
1a
d3lgea_
A:
1b
d3lgeb_
B:
1c
d3lgec_
C:
1d
d3lged_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_3lgeA00 (A:1-363)
1b: CATH_3lgeD00 (D:1-363)
1c: CATH_3lgeB00 (B:1-363)
1d: CATH_3lgeC00 (C:1-363)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
European rabbit,japanese white rabbit,domesticrabbit,rabbits (Oryctolagus cuniculus)
(1)
1a
3lgeA00
A:1-363
1b
3lgeD00
D:1-363
1c
3lgeB00
B:1-363
1d
3lgeC00
C:1-363
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Glycolytic_3lgeD01 (D:14-363)
1b: PFAM_Glycolytic_3lgeD02 (D:14-363)
1c: PFAM_Glycolytic_3lgeD03 (D:14-363)
1d: PFAM_Glycolytic_3lgeD04 (D:14-363)
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)
Clan
:
no clan defined [family: Glycolytic]
(21)
Family
:
Glycolytic
(21)
Oryctolagus cuniculus (Rabbit)
(10)
1a
Glycolytic-3lgeD01
D:14-363
1b
Glycolytic-3lgeD02
D:14-363
1c
Glycolytic-3lgeD03
D:14-363
1d
Glycolytic-3lgeD04
D:14-363
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Asym.Unit (525 KB)
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