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3LFY
Biol. Unit 1
Info
Asym.Unit (77 KB)
Biol.Unit 1 (37 KB)
Biol.Unit 2 (37 KB)
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(1)
Title
:
CTD OF TAROCYSTATIN IN COMPLEX WITH PAPAIN
Authors
:
M. H. Chu, K. L. Liu, K. W. Yeh, Y. S. Cheng
Date
:
19 Jan 10 (Deposition) - 21 Jul 10 (Release) - 21 Jul 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,C
Biol. Unit 1: A (1x)
Biol. Unit 2: C (1x)
Keywords
:
Cystatin, Tarocystatin, Cecpi, Papain, Phytocystatin, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. H. Chu, K. L. Liu, K. W. Yeh, Y. S. Cheng
Complex Structure Of Tarocystatin With Papain And Characterization Of Tarocystatin Proposed The Role Of C-Terminal Extension For Inhibitory Mechanism Of Group-2 Phytocystatins
To Be Published
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: ASPARAGINE (ASNa)
1b: ASPARAGINE (ASNb)
2a: GLYCINE (GLYa)
3a: CYSTEINESULFONIC ACID (OCSa)
3b: CYSTEINESULFONIC ACID (OCSb)
4a: SERINE (SERa)
4b: SERINE (SERb)
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Label:
No.
Name
Count
Type
Full Name
1
ASN
1
Mod. Amino Acid
ASPARAGINE
2
GLY
-1
Mod. Amino Acid
GLYCINE
3
OCS
1
Mod. Amino Acid
CYSTEINESULFONIC ACID
4
SER
1
Mod. Amino Acid
SERINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP A:177 , ASN A:214
BINDING SITE FOR RESIDUE SER A 213
2
AC2
SOFTWARE
GLN A:142 , TRP A:177 , SER A:213 , HOH A:296
BINDING SITE FOR RESIDUE ASN A 214
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: THIOL_PROTEASE_CYS (A:19-30)
2: THIOL_PROTEASE_HIS (A:157-167)
3: THIOL_PROTEASE_ASN (A:170-189)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOL_PROTEASE_CYS
PS00139
Eukaryotic thiol (cysteine) proteases cysteine active site.
PAPA1_CARPA
152-163
1
A:19-30
-
2
THIOL_PROTEASE_HIS
PS00639
Eukaryotic thiol (cysteine) proteases histidine active site.
PAPA1_CARPA
290-300
1
A:157-167
-
3
THIOL_PROTEASE_ASN
PS00640
Eukaryotic thiol (cysteine) proteases asparagine active site.
PAPA1_CARPA
303-322
1
A:170-189
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3lfya_ (A:)
1b: SCOP_d3lfyc_ (C:)
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Cysteine proteinases
(392)
Superfamily
:
Cysteine proteinases
(392)
Family
:
Papain-like
(200)
Protein domain
:
Papain
(22)
Papaya (Carica papaya) [TaxId: 3649]
(22)
1a
d3lfya_
A:
1b
d3lfyc_
C:
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Peptidase_C1_3lfyC01 (C:1-210)
1b: PFAM_Peptidase_C1_3lfyC02 (C:1-210)
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(
)
Clan
:
Peptidase_CA
(169)
Family
:
Peptidase_C1
(81)
Carica papaya (Papaya)
(14)
1a
Peptidase_C1-3lfyC01
C:1-210
1b
Peptidase_C1-3lfyC02
C:1-210
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Asym.Unit (77 KB)
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