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3LA6
Asym. Unit
Info
Asym.Unit (667 KB)
Biol.Unit 1 (332 KB)
Biol.Unit 2 (331 KB)
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(1)
Title
:
OCTAMERIC KINASE DOMAIN OF THE E. COLI TYROSINE KINASE WZC WITH BOUND ADP
Authors
:
J. Gruszczyk, S. Nessler, V. Gueguen-Chaignon, A. Vigouroux, E. Beche C. Grangeasse
Date
:
06 Jan 10 (Deposition) - 25 Aug 10 (Release) - 12 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Biol. Unit 2: I,J,K,L,M,N,O,P (1x)
Keywords
:
P-Loop Protein, Nucleotide Binding Domain, Walker A Motif, Bacterial Protein Kinase, Oligomerization, Intermolecular Phosphorylation, Exopolysaccharide Synthesis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Bechet, J. Gruszczyk, R. Terreux, V. Gueguen-Chaignon, A. Vigouroux, B. Obadia, A. J. Cozzone, S. Nessler, C. Grangeasse
Identification Of Structural And Molecular Determinants Of The Tyrosine-Kinase Wzc And Implications In Capsular Polysaccharide Export
Mol. Microbiol. V. 77 1315 2010
[
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Hetero Components
(2, 32)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
1c: ADENOSINE-5'-DIPHOSPHATE (ADPc)
1d: ADENOSINE-5'-DIPHOSPHATE (ADPd)
1e: ADENOSINE-5'-DIPHOSPHATE (ADPe)
1f: ADENOSINE-5'-DIPHOSPHATE (ADPf)
1g: ADENOSINE-5'-DIPHOSPHATE (ADPg)
1h: ADENOSINE-5'-DIPHOSPHATE (ADPh)
1i: ADENOSINE-5'-DIPHOSPHATE (ADPi)
1j: ADENOSINE-5'-DIPHOSPHATE (ADPj)
1k: ADENOSINE-5'-DIPHOSPHATE (ADPk)
1l: ADENOSINE-5'-DIPHOSPHATE (ADPl)
1m: ADENOSINE-5'-DIPHOSPHATE (ADPm)
1n: ADENOSINE-5'-DIPHOSPHATE (ADPn)
1o: ADENOSINE-5'-DIPHOSPHATE (ADPo)
1p: ADENOSINE-5'-DIPHOSPHATE (ADPp)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
2k: CALCIUM ION (CAk)
2l: CALCIUM ION (CAl)
2m: CALCIUM ION (CAm)
2n: CALCIUM ION (CAn)
2o: CALCIUM ION (CAo)
2p: CALCIUM ION (CAp)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
16
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
CA
16
Ligand/Ion
CALCIUM ION
[
close Hetero Component info
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Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:471 , SER A:473 , GLN A:476 , LYS A:477 , ASP A:480 , LYS A:492 , GLN A:493 , SER A:537 , ILE A:538 , GLY A:539 , MET A:540 , THR A:541 , PHE A:542 , TYR A:569 , ASN A:696 , SER A:697 , CA A:1001
BINDING SITE FOR RESIDUE ADP A 1000
02
AC2
SOFTWARE
THR A:541 , ASP A:564 , ADP A:1000
BINDING SITE FOR RESIDUE CA A 1001
03
AC3
SOFTWARE
PRO B:471 , LEU B:472 , SER B:473 , GLN B:476 , ASP B:480 , GLN B:493 , SER B:537 , ILE B:538 , GLY B:539 , MET B:540 , THR B:541 , PHE B:542 , TYR B:569 , ASN B:696 , SER B:697 , CA B:1001
BINDING SITE FOR RESIDUE ADP B 1000
04
AC4
SOFTWARE
THR B:541 , ASP B:564 , ADP B:1000
BINDING SITE FOR RESIDUE CA B 1001
05
AC5
SOFTWARE
PRO C:471 , LEU C:472 , SER C:473 , GLN C:476 , ASP C:480 , LYS C:492 , GLN C:493 , SER C:537 , ILE C:538 , GLY C:539 , MET C:540 , THR C:541 , PHE C:542 , TYR C:569 , ASN C:696 , SER C:697 , CA C:1001
BINDING SITE FOR RESIDUE ADP C 1000
06
AC6
SOFTWARE
THR C:541 , ADP C:1000
BINDING SITE FOR RESIDUE CA C 1001
07
AC7
SOFTWARE
PRO D:471 , LEU D:472 , SER D:473 , GLN D:476 , ASP D:480 , LYS D:492 , GLN D:493 , SER D:537 , ILE D:538 , GLY D:539 , MET D:540 , THR D:541 , PHE D:542 , TYR D:569 , ASN D:696 , SER D:697 , CA D:1001
BINDING SITE FOR RESIDUE ADP D 1000
08
AC8
SOFTWARE
THR D:541 , ASP D:564 , ADP D:1000
BINDING SITE FOR RESIDUE CA D 1001
09
AC9
SOFTWARE
PRO E:471 , LEU E:472 , SER E:473 , GLN E:476 , ASP E:480 , LYS E:492 , GLN E:493 , SER E:537 , ILE E:538 , GLY E:539 , MET E:540 , THR E:541 , PHE E:542 , TYR E:569 , ASN E:696 , SER E:697 , CA E:1001
BINDING SITE FOR RESIDUE ADP E 1000
10
BC1
SOFTWARE
THR E:541 , ASP E:642 , ADP E:1000
BINDING SITE FOR RESIDUE CA E 1001
11
BC2
SOFTWARE
PRO F:471 , LEU F:472 , SER F:473 , GLN F:476 , ASP F:480 , SER F:537 , ILE F:538 , GLY F:539 , MET F:540 , THR F:541 , PHE F:542 , TYR F:569 , ASN F:696 , SER F:697 , CA F:1001
BINDING SITE FOR RESIDUE ADP F 1000
12
BC3
SOFTWARE
THR F:541 , ADP F:1000
BINDING SITE FOR RESIDUE CA F 1001
13
BC4
SOFTWARE
ILE G:470 , PRO G:471 , LEU G:472 , SER G:473 , GLN G:476 , LYS G:477 , ASP G:480 , GLN G:493 , SER G:537 , ILE G:538 , GLY G:539 , MET G:540 , THR G:541 , PHE G:542 , TYR G:569 , ASN G:696 , SER G:697 , CA G:1001
BINDING SITE FOR RESIDUE ADP G 1000
14
BC5
SOFTWARE
THR G:541 , ASP G:564 , ADP G:1000
BINDING SITE FOR RESIDUE CA G 1001
15
BC6
SOFTWARE
PRO H:471 , LEU H:472 , SER H:473 , GLN H:476 , ASP H:480 , GLN H:493 , SER H:537 , ILE H:538 , GLY H:539 , MET H:540 , THR H:541 , PHE H:542 , TYR H:569 , ASN H:696 , SER H:697 , CA H:1001
BINDING SITE FOR RESIDUE ADP H 1000
16
BC7
SOFTWARE
THR H:541 , ASP H:564 , ADP H:1000
BINDING SITE FOR RESIDUE CA H 1001
17
BC8
SOFTWARE
PRO I:471 , LEU I:472 , SER I:473 , GLN I:476 , ASP I:480 , LYS I:492 , GLN I:493 , SER I:537 , ILE I:538 , GLY I:539 , MET I:540 , THR I:541 , PHE I:542 , TYR I:569 , ASN I:696 , SER I:697 , CA I:1001
BINDING SITE FOR RESIDUE ADP I 1000
18
BC9
SOFTWARE
THR I:541 , ASP I:564 , ADP I:1000 , TYR J:715
BINDING SITE FOR RESIDUE CA I 1001
19
CC1
SOFTWARE
PRO J:471 , LEU J:472 , SER J:473 , GLN J:476 , ASP J:480 , LYS J:492 , GLN J:493 , SER J:537 , ILE J:538 , GLY J:539 , MET J:540 , THR J:541 , PHE J:542 , TYR J:569 , ASN J:696 , SER J:697 , CA J:1001
BINDING SITE FOR RESIDUE ADP J 1000
20
CC2
SOFTWARE
THR J:541 , ADP J:1000
BINDING SITE FOR RESIDUE CA J 1001
21
CC3
SOFTWARE
PRO K:471 , LEU K:472 , SER K:473 , GLN K:476 , ASP K:480 , LYS K:492 , GLN K:493 , SER K:537 , ILE K:538 , GLY K:539 , MET K:540 , THR K:541 , PHE K:542 , TYR K:569 , ASN K:696 , CA K:1001
BINDING SITE FOR RESIDUE ADP K 1000
22
CC4
SOFTWARE
THR K:541 , ASP K:564 , ADP K:1000 , TYR L:715
BINDING SITE FOR RESIDUE CA K 1001
23
CC5
SOFTWARE
PRO L:471 , LEU L:472 , SER L:473 , GLN L:476 , ASP L:480 , SER L:537 , ILE L:538 , GLY L:539 , MET L:540 , THR L:541 , PHE L:542 , TYR L:569 , ASN L:696 , SER L:697 , CA L:1001
BINDING SITE FOR RESIDUE ADP L 1000
24
CC6
SOFTWARE
THR L:541 , ADP L:1000
BINDING SITE FOR RESIDUE CA L 1001
25
CC7
SOFTWARE
PRO M:471 , LEU M:472 , SER M:473 , GLN M:476 , ASP M:480 , SER M:537 , ILE M:538 , GLY M:539 , MET M:540 , THR M:541 , PHE M:542 , TYR M:569 , ASN M:696 , SER M:697 , CA M:1001
BINDING SITE FOR RESIDUE ADP M 1000
26
CC8
SOFTWARE
THR M:541 , ADP M:1000
BINDING SITE FOR RESIDUE CA M 1001
27
CC9
SOFTWARE
PRO N:471 , LEU N:472 , SER N:473 , GLN N:476 , ASP N:480 , LYS N:492 , GLN N:493 , SER N:537 , ILE N:538 , GLY N:539 , MET N:540 , THR N:541 , PHE N:542 , TYR N:569 , ASN N:696 , SER N:697 , CA N:1001
BINDING SITE FOR RESIDUE ADP N 1000
28
DC1
SOFTWARE
THR N:541 , ADP N:1000
BINDING SITE FOR RESIDUE CA N 1001
29
DC2
SOFTWARE
PRO O:471 , LEU O:472 , SER O:473 , GLN O:476 , ASP O:480 , GLN O:493 , SER O:537 , ILE O:538 , GLY O:539 , MET O:540 , THR O:541 , PHE O:542 , TYR O:569 , ASN O:696 , CA O:1001
BINDING SITE FOR RESIDUE ADP O 1000
30
DC3
SOFTWARE
THR O:541 , ASP O:564 , ADP O:1000
BINDING SITE FOR RESIDUE CA O 1001
31
DC4
SOFTWARE
PRO P:471 , LEU P:472 , SER P:473 , GLN P:476 , ASP P:480 , SER P:537 , ILE P:538 , GLY P:539 , MET P:540 , THR P:541 , PHE P:542 , TYR P:569 , ASN P:696 , SER P:697 , CA P:1001
BINDING SITE FOR RESIDUE ADP P 1000
32
DC5
SOFTWARE
THR P:541 , ADP P:1000
BINDING SITE FOR RESIDUE CA P 1001
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 16)
Info
all PFAM domains
1a: PFAM_AAA_31_3la6P01 (P:527-675)
1b: PFAM_AAA_31_3la6P02 (P:527-675)
1c: PFAM_AAA_31_3la6P03 (P:527-675)
1d: PFAM_AAA_31_3la6P04 (P:527-675)
1e: PFAM_AAA_31_3la6P05 (P:527-675)
1f: PFAM_AAA_31_3la6P06 (P:527-675)
1g: PFAM_AAA_31_3la6P07 (P:527-675)
1h: PFAM_AAA_31_3la6P08 (P:527-675)
1i: PFAM_AAA_31_3la6P09 (P:527-675)
1j: PFAM_AAA_31_3la6P10 (P:527-675)
1k: PFAM_AAA_31_3la6P11 (P:527-675)
1l: PFAM_AAA_31_3la6P12 (P:527-675)
1m: PFAM_AAA_31_3la6P13 (P:527-675)
1n: PFAM_AAA_31_3la6P14 (P:527-675)
1o: PFAM_AAA_31_3la6P15 (P:527-675)
1p: PFAM_AAA_31_3la6P16 (P:527-675)
View:
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
AAA_31
(4)
Escherichia coli (strain K12)
(1)
1a
AAA_31-3la6P01
P:527-675
1b
AAA_31-3la6P02
P:527-675
1c
AAA_31-3la6P03
P:527-675
1d
AAA_31-3la6P04
P:527-675
1e
AAA_31-3la6P05
P:527-675
1f
AAA_31-3la6P06
P:527-675
1g
AAA_31-3la6P07
P:527-675
1h
AAA_31-3la6P08
P:527-675
1i
AAA_31-3la6P09
P:527-675
1j
AAA_31-3la6P10
P:527-675
1k
AAA_31-3la6P11
P:527-675
1l
AAA_31-3la6P12
P:527-675
1m
AAA_31-3la6P13
P:527-675
1n
AAA_31-3la6P14
P:527-675
1o
AAA_31-3la6P15
P:527-675
1p
AAA_31-3la6P16
P:527-675
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