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3L70
Asym. Unit
Info
Asym.Unit (674 KB)
Biol.Unit 1 (660 KB)
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(1)
Title
:
CYTOCHROME BC1 COMPLEX FROM CHICKEN WITH TRIFLOXYSTROBIN BOUND
Authors
:
L. Huang, E. A. Berry
Date
:
27 Dec 09 (Deposition) - 02 Feb 10 (Release) - 29 Oct 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,N,O,P,Q,R,S,T,U,V,W
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,N,O,P,Q,R,S,T,U,V,W (1x)
Keywords
:
Cytochrome Bc1, Membrane Protein, Heme Protein, Rieske Iron Sulfur Protein, Cytochrome B, Cytochrome C1, Complex Iii, Mitochondrial Processing Protein, Ubiquinone, Trifloxystrobin Oxidoreductase, Redox Enzyme Respiratory Chain, Electron Transport, Heme, Inner Membrane, Membrane, Strobilurins Binding, Mitochondrion, Transmembrane, Stigmatellin, Iron, Mitochondrial Inner Membrane, Respiratory Chain, Iron-Sulfur, Transit Peptide, Metal-Binding, Mitochondrion Inner Membrane, Transport, Disulfide Bond, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Huang, E. A. Berry
Famoxadone And Related Inhibitors Bind Like Methoxy Acrylat Inhibitors In The Qo Site Of The Bc1 Compl And Fix The Rieske Iron-Sulfur Protein In A Positio Close To But Distinct From That Seen With Stigmatellin And Other "Distal Qo Inhibitors.
To Be Published
[
close entry info
]
Hetero Components
(10, 56)
Info
All Hetero Components
01a: B-OCTYLGLUCOSIDE (BOGa)
01b: B-OCTYLGLUCOSIDE (BOGb)
01c: B-OCTYLGLUCOSIDE (BOGc)
01d: B-OCTYLGLUCOSIDE (BOGd)
01e: B-OCTYLGLUCOSIDE (BOGe)
02a: CARDIOLIPIN (CDLa)
02b: CARDIOLIPIN (CDLb)
02c: CARDIOLIPIN (CDLc)
02d: CARDIOLIPIN (CDLd)
03a: FE2/S2 (INORGANIC) CLUSTER (FESa)
03b: FE2/S2 (INORGANIC) CLUSTER (FESb)
04a: GLYCEROL (GOLa)
04b: GLYCEROL (GOLb)
05a: HEME C (HECa)
05b: HEME C (HECb)
06a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
06b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
06c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
06d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
07a: METHYL (2E)-(METHOXYIMINO)(2-{[({(... (JZVa)
07b: METHYL (2E)-(METHOXYIMINO)(2-{[({(... (JZVb)
08a: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEa)
08b: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEb)
08c: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEc)
08d: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEd)
08e: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEe)
08f: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEf)
09a: (UNKa)
09aa: (UNKaa)
09b: (UNKb)
09c: (UNKc)
09d: (UNKd)
09e: (UNKe)
09f: (UNKf)
09g: (UNKg)
09h: (UNKh)
09i: (UNKi)
09j: (UNKj)
09k: (UNKk)
09l: (UNKl)
09m: (UNKm)
09n: (UNKn)
09o: (UNKo)
09p: (UNKp)
09q: (UNKq)
09r: (UNKr)
09s: (UNKs)
09t: (UNKt)
09u: (UNKu)
09v: (UNKv)
09w: (UNKw)
09x: (UNKx)
09y: (UNKy)
09z: (UNKz)
10a: COENZYME Q10, (2Z,6E,10Z,14E,18E,2... (UQa)
10b: COENZYME Q10, (2Z,6E,10Z,14E,18E,2... (UQb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BOG
5
Ligand/Ion
B-OCTYLGLUCOSIDE
2
CDL
4
Ligand/Ion
CARDIOLIPIN
3
FES
2
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
4
GOL
2
Ligand/Ion
GLYCEROL
5
HEC
2
Ligand/Ion
HEME C
6
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
7
JZV
2
Ligand/Ion
METHYL (2E)-(METHOXYIMINO)(2-{[({(1Z)-1-[3-(TRIFLUOROMETHYL)PHENYL]ETHYLIDENE}AMINO)OXY]METHYL}PHENYL)ETHANOATE
8
PEE
6
Ligand/Ion
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
9
UNK
27
Mod. Amino Acid
10
UQ
2
Ligand/Ion
COENZYME Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-ISOMER
[
close Hetero Component info
]
Sites
(29, 29)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN C:45 , ILE C:46 , GLY C:49 , LEU C:50 , LEU C:52 , ALA C:53 , ARG C:81 , HIS C:84 , THR C:127 , GLY C:131 , PRO C:135 , HIS C:183 , PHE C:184 , PRO C:187
BINDING SITE FOR RESIDUE HEM C 501
02
AC2
SOFTWARE
TRP C:32 , GLY C:35 , LEU C:38 , HIS C:98 , ARG C:101 , SER C:107 , THR C:113 , TRP C:114 , GLY C:117 , LEU C:120 , THR C:194 , HIS C:197 , LEU C:198 , SER C:206 , ASN C:207 , HOH C:381 , HOH C:385 , UQ C:2002
BINDING SITE FOR RESIDUE HEM C 502
03
AC3
SOFTWARE
VAL D:36 , CYS D:37 , CYS D:40 , HIS D:41 , ASN D:105 , PRO D:110 , ILE D:116 , ARG D:120 , TYR D:126 , PHE D:153 , ILE D:158 , GLY D:159 , MET D:160 , PRO D:163 , ILE D:164
BINDING SITE FOR RESIDUE HEC D 501
04
AC4
SOFTWARE
CYS E:139 , HIS E:141 , LEU E:142 , CYS E:144 , CYS E:158 , HIS E:161 , SER E:163
BINDING SITE FOR RESIDUE FES E 501
05
AC5
SOFTWARE
GLN P:45 , ILE P:46 , GLY P:49 , LEU P:50 , LEU P:52 , ALA P:53 , ARG P:81 , HIS P:84 , THR P:127 , GLY P:131 , PRO P:135 , HIS P:183 , PHE P:184 , PRO P:187
BINDING SITE FOR RESIDUE HEM P 501
06
AC6
SOFTWARE
TRP P:32 , GLY P:35 , LEU P:38 , HIS P:98 , ARG P:101 , SER P:107 , THR P:113 , TRP P:114 , GLY P:117 , VAL P:118 , LEU P:120 , HIS P:197 , LEU P:198 , SER P:206 , ASN P:207 , HOH P:381 , HOH P:386
BINDING SITE FOR RESIDUE HEM P 502
07
AC7
SOFTWARE
VAL Q:36 , CYS Q:37 , CYS Q:40 , HIS Q:41 , ASN Q:105 , PRO Q:110 , ARG Q:120 , TYR Q:126 , PHE Q:153 , GLY Q:159 , MET Q:160 , PRO Q:163 , ILE Q:164
BINDING SITE FOR RESIDUE HEC Q 501
08
AC8
SOFTWARE
CYS R:139 , HIS R:141 , LEU R:142 , CYS R:158 , HIS R:161 , SER R:163
BINDING SITE FOR RESIDUE FES R 501
09
AC9
SOFTWARE
MET C:125 , PHE C:129 , TYR C:132 , VAL C:133 , GLY C:143 , ALA C:144 , ILE C:147 , LYS C:270 , PRO C:271 , GLU C:272 , TYR C:274 , PHE C:275 , LEU C:295
BINDING SITE FOR RESIDUE JZV C 2001
10
BC1
SOFTWARE
SER C:18 , LEU C:22 , ILE C:28 , HIS C:202 , SER C:206 , PHE C:221 , ASP C:229 , HOH C:386 , HEM C:502
BINDING SITE FOR RESIDUE UQ C 2002
11
BC2
SOFTWARE
ALA C:30 , CDL C:2004 , TYR D:220 , LYS D:223 , ARG D:224 , HIS F:72 , ARG F:73 , ARG G:40
BINDING SITE FOR RESIDUE CDL D 2003
12
BC3
SOFTWARE
SER C:29 , ALA C:30 , TRP C:31 , PEE C:2007 , CDL D:2003 , HIS F:72 , ARG G:40 , GLN G:44
BINDING SITE FOR RESIDUE CDL C 2004
13
BC4
SOFTWARE
TYR A:442 , PEE A:2008 , PHE C:227 , MET D:222 , THR E:40 , CYS E:44 , THR E:47 , PHE J:14 , VAL J:24 , GLU J:32
BINDING SITE FOR RESIDUE PEE E 2005
14
BC5
SOFTWARE
TRP C:31 , PHE C:96 , LEU C:97 , TYR C:104 , TYR C:105 , THR C:317 , PHE C:326 , TRP C:327 , LEU C:333 , TYR C:359 , CDL C:2004 , TYR F:29 , GLN G:44
BINDING SITE FOR RESIDUE PEE C 2007
15
BC6
SOFTWARE
TYR A:442 , HIS C:222 , ILE C:230 , PEE E:2005
BINDING SITE FOR RESIDUE PEE A 2008
16
BC7
SOFTWARE
TYR C:76 , GLN D:200 , ARG D:203 , MET D:204 , LYS D:207 , BOG D:2091 , ALA E:50 , ASN E:53 , GLN E:57
BINDING SITE FOR RESIDUE BOG D 2009
17
BC8
SOFTWARE
GLN D:200 , ARG D:203 , BOG D:2009
BINDING SITE FOR RESIDUE BOG D 2091
18
BC9
SOFTWARE
MET P:14 , LEU P:198 , THR P:199 , HIS P:202
BINDING SITE FOR RESIDUE BOG P 2010
19
CC1
SOFTWARE
ARG C:81 , ASN C:256 , PHE C:257
BINDING SITE FOR RESIDUE GOL C 2011
20
CC2
SOFTWARE
MET P:125 , PHE P:129 , TYR P:132 , VAL P:133 , GLY P:143 , ALA P:144 , ILE P:147 , LYS P:270 , PRO P:271 , GLU P:272 , TYR P:274 , PHE P:275 , LEU P:295
BINDING SITE FOR RESIDUE JZV P 3001
21
CC3
SOFTWARE
LEU P:22 , ALA P:24 , ILE P:28 , ALA P:39 , LEU P:198 , LEU P:201 , HIS P:202 , SER P:206 , PHE P:221 , ASP P:229 , HOH P:959
BINDING SITE FOR RESIDUE UQ P 3002
22
CC4
SOFTWARE
ALA P:30 , CDL P:3004 , TYR Q:220 , LYS Q:223 , ARG Q:224 , HIS S:72 , ARG S:73 , LEU T:34 , ARG T:40
BINDING SITE FOR RESIDUE CDL Q 3003
23
CC5
SOFTWARE
SER P:29 , ALA P:30 , TRP P:31 , TYR P:105 , PEE P:3007 , CDL Q:3003 , HIS S:72 , ARG T:40 , PHE T:41 , GLN T:44
BINDING SITE FOR RESIDUE CDL P 3004
24
CC6
SOFTWARE
TYR N:442 , PHE P:227 , ILE P:230 , MET Q:222 , THR R:40 , CYS R:44 , PHE W:14 , VAL W:24 , GLU W:32
BINDING SITE FOR RESIDUE PEE R 3005
25
CC7
SOFTWARE
TRP P:31 , PHE P:96 , LEU P:97 , TYR P:104 , TYR P:105 , THR P:317 , TRP P:327 , LEU P:333 , TYR P:359 , CDL P:3004 , TYR S:29 , GLN T:44
BINDING SITE FOR RESIDUE PEE P 3007
26
CC8
SOFTWARE
TYR N:442 , HIS P:222
BINDING SITE FOR RESIDUE PEE N 3008
27
CC9
SOFTWARE
TYR P:76 , GLN Q:200 , ARG Q:203 , MET Q:204 , LYS Q:207 , ASN R:53 , GLN R:57
BINDING SITE FOR RESIDUE BOG Q 3009
28
DC1
SOFTWARE
GLN Q:200
BINDING SITE FOR RESIDUE BOG Q 3091
29
DC2
SOFTWARE
PHE P:64 , PRO P:135 , ASN P:256 , PHE P:257 , TYR Q:115
BINDING SITE FOR RESIDUE GOL P 3011
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(3, 5)
Info
All PROSITE Patterns/Profiles
1: CYTB_NTER (C:1-210)
2: RIESKE (E:96-194,R:96-194)
3: CYTB_CTER (C:211-380,P:211-380)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTB_NTER
PS51002
Cytochrome b/b6 N-terminal region profile.
CYB_CHICK
1-210
1
C:1-210
2
RIESKE
PS51296
Rieske [2Fe-2S] iron-sulfur domain profile.
UCRI_CHICK
172-270
2
E:96-194
R:96-194
3
CYTB_CTER
PS51003
Cytochrome b/b6 C-terminal region profile.
CYB_CHICK
211-380
2
C:211-380
P:211-380
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(9, 23)
Info
All SCOP Domains
1a: SCOP_d3l70d1 (D:1-195)
1b: SCOP_d3l70q1 (Q:1-195)
2a: SCOP_d3l70a1 (A:1-233)
2b: SCOP_d3l70a2 (A:234-444)
2c: SCOP_d3l70b1 (B:20-235)
2d: SCOP_d3l70b2 (B:236-439)
2e: SCOP_d3l70n1 (N:3-233)
2f: SCOP_d3l70o1 (O:18-235)
2g: SCOP_d3l70o2 (O:236-439)
3a: SCOP_d3l70f_ (F:)
3b: SCOP_d3l70s_ (S:)
4a: SCOP_d3l70c2 (C:262-380)
4b: SCOP_d3l70p2 (P:262-380)
5a: SCOP_d3l70c1 (C:1-261)
5b: SCOP_d3l70p1 (P:2-261)
6a: SCOP_d3l70h_ (H:)
6b: SCOP_d3l70u_ (U:)
7a: SCOP_d3l70d2 (D:196-241)
7b: SCOP_d3l70q2 (Q:196-241)
8a: SCOP_d3l70j_ (J:)
8b: SCOP_d3l70w_ (W:)
9a: SCOP_d3l70g_ (G:)
9b: SCOP_d3l70t_ (T:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome c
(308)
Superfamily
:
Cytochrome c
(308)
Family
:
Cytochrome bc1 domain
(36)
Protein domain
:
automated matches
(9)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
1a
d3l70d1
D:1-195
1b
d3l70q1
Q:1-195
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
LuxS/MPP-like metallohydrolase
(89)
Superfamily
:
LuxS/MPP-like metallohydrolase
(89)
Family
:
automated matches
(9)
Protein domain
:
automated matches
(9)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
2a
d3l70a1
A:1-233
2b
d3l70a2
A:234-444
2c
d3l70b1
B:20-235
2d
d3l70b2
B:236-439
2e
d3l70n1
N:3-233
2f
d3l70o1
O:18-235
2g
d3l70o2
O:236-439
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Superfamily
:
14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Family
:
14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Protein domain
:
automated matches
(15)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
3a
d3l70f_
F:
3b
d3l70s_
S:
Fold
:
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(46)
Superfamily
:
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(46)
Family
:
a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(39)
Protein domain
:
Mitochondrial cytochrome b subunit, C-terminal domain
(30)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
4a
d3l70c2
C:262-380
4b
d3l70p2
P:262-380
Fold
:
Heme-binding four-helical bundle
(113)
Superfamily
:
Transmembrane di-heme cytochromes
(48)
Family
:
Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(46)
Protein domain
:
Mitochondrial cytochrome b subunit, N-terminal domain
(30)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
5a
d3l70c1
C:1-261
5b
d3l70p1
P:2-261
Fold
:
Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Superfamily
:
Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Family
:
Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Protein domain
:
automated matches
(16)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
6a
d3l70h_
H:
6b
d3l70u_
U:
Fold
:
Single transmembrane helix
(568)
Superfamily
:
Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
(36)
Family
:
automated matches
(9)
Protein domain
:
automated matches
(9)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
7a
d3l70d2
D:196-241
7b
d3l70q2
Q:196-241
Superfamily
:
Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Family
:
Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Protein domain
:
automated matches
(11)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
8a
d3l70j_
J:
8b
d3l70w_
W:
Superfamily
:
Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Family
:
Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
(36)
Protein domain
:
automated matches
(8)
Chicken (Gallus gallus) [TaxId: 9031]
(8)
9a
d3l70g_
G:
9b
d3l70t_
T:
[
close SCOP info
]
CATH Domains
(11, 28)
Info
all CATH domains
01a: CATH_3l70A02 (A:239-442)
01b: CATH_3l70N02 (N:239-442)
01c: CATH_3l70B01 (B:20-227)
01d: CATH_3l70O01 (O:18-227)
01e: CATH_3l70B02 (B:239-439)
01f: CATH_3l70O02 (O:239-439)
01g: CATH_3l70A01 (A:14-227)
01h: CATH_3l70N01 (N:14-227)
02a: CATH_3l70D01 (D:1-196)
02b: CATH_3l70Q01 (Q:1-196)
03a: CATH_3l70F00 (F:10-110)
03b: CATH_3l70S00 (S:10-110)
04a: CATH_3l70H00 (H:9-78)
04b: CATH_3l70U00 (U:12-78)
05a: CATH_3l70P00 (P:2-380)
05b: CATH_3l70C00 (C:1-380)
06a: CATH_3l70D02 (D:197-241)
06b: CATH_3l70Q02 (Q:197-241)
07a: CATH_3l70G00 (G:2-81)
07b: CATH_3l70T00 (T:2-80)
08a: CATH_3l70W00 (W:4-63)
08b: CATH_3l70J00 (J:4-64)
09a: CATH_3l70E01 (E:1-64)
09b: CATH_3l70R01 (R:1-64)
10a: CATH_3l70E02 (E:65-196)
10b: CATH_3l70R02 (R:65-196)
11a: CATH_3l70I00 (I:28-77)
11b: CATH_3l70V00 (V:28-77)
View:
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Classes
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Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Cytochrome Bc1 Complex; Chain A, domain 1
(45)
Homologous Superfamily
:
Cytochrome Bc1 Complex; Chain A, domain 1
(45)
Chicken (Gallus gallus)
(15)
01a
3l70A02
A:239-442
01b
3l70N02
N:239-442
01c
3l70B01
B:20-227
01d
3l70O01
O:18-227
01e
3l70B02
B:239-439
01f
3l70O02
O:239-439
01g
3l70A01
A:14-227
01h
3l70N01
N:14-227
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Cytochrome Bc1 Complex; Chain D, domain 2
(279)
Homologous Superfamily
:
Cytochrome c
(279)
Chicken (Gallus gallus)
(15)
02a
3l70D01
D:1-196
02b
3l70Q01
Q:1-196
Topology
:
Cytochrome Bc1 Complex; Chain F
(39)
Homologous Superfamily
:
Cytochrome Bc1 Complex; Chain F
(39)
Chicken (Gallus gallus)
(15)
03a
3l70F00
F:10-110
03b
3l70S00
S:10-110
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
[code=1.10.287.20, no name defined]
(39)
Chicken (Gallus gallus)
(15)
04a
3l70H00
H:9-78
04b
3l70U00
U:12-78
Architecture
:
Up-down Bundle
(3216)
Topology
:
Cytochrome Bc1 Complex; Chain C
(51)
Homologous Superfamily
:
Cytochrome Bc1 Complex; Chain C
(51)
Chicken (Gallus gallus)
(15)
05a
3l70P00
P:2-380
05b
3l70C00
C:1-380
Topology
:
Single alpha-helices involved in coiled-coils or other helix-helix interfaces
(552)
Homologous Superfamily
:
[code=1.20.5.100, no name defined]
(56)
Chicken (Gallus gallus)
(15)
06a
3l70D02
D:197-241
06b
3l70Q02
Q:197-241
Homologous Superfamily
:
[code=1.20.5.210, no name defined]
(39)
Chicken (Gallus gallus)
(15)
07a
3l70G00
G:2-81
07b
3l70T00
T:2-80
Homologous Superfamily
:
[code=1.20.5.260, no name defined]
(39)
Chicken (Gallus gallus)
(15)
08a
3l70W00
W:4-63
08b
3l70J00
J:4-64
Homologous Superfamily
:
[code=1.20.5.270, no name defined]
(39)
Chicken (Gallus gallus)
(15)
09a
3l70E01
E:1-64
09b
3l70R01
R:1-64
Class
:
Mainly Beta
(13760)
Architecture
:
3-layer Sandwich
(102)
Topology
:
Rieske Iron-sulfur Protein
(99)
Homologous Superfamily
:
'Rieske'-like iron-sulphur domains
(99)
Chicken (Gallus gallus)
(15)
10a
3l70E02
E:65-196
10b
3l70R02
R:65-196
Architecture
:
Ribbon
(789)
Topology
:
Cytochrome Bc1 Complex; Chain I
(29)
Homologous Superfamily
:
Cytochrome Bc1 Complex; Chain I
(29)
Chicken (Gallus gallus)
(12)
11a
3l70I00
I:28-77
11b
3l70V00
V:28-77
[
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Pfam Domains
(12, 28)
Info
all PFAM domains
01a: PFAM_Cytochrom_B_N_2_3l70P01 (P:89-254)
01b: PFAM_Cytochrom_B_N_2_3l70P02 (P:89-254)
02a: PFAM_Cytochrom_C1_3l70Q01 (Q:12-230)
02b: PFAM_Cytochrom_C1_3l70Q02 (Q:12-230)
03a: PFAM_Rieske_3l70R01 (R:96-188)
03b: PFAM_Rieske_3l70R02 (R:96-188)
04a: PFAM_Peptidase_M16_3l70O01 (O:34-180)
04b: PFAM_Peptidase_M16_3l70O02 (O:34-180)
04c: PFAM_Peptidase_M16_3l70N01 (N:24-171)
04d: PFAM_Peptidase_M16_3l70N02 (N:24-171)
05a: PFAM_Peptidase_M16_C_3l70O03 (O:185-364)
05b: PFAM_Peptidase_M16_C_3l70O04 (O:185-364)
05c: PFAM_Peptidase_M16_C_3l70N03 (N:176-361)
05d: PFAM_Peptidase_M16_C_3l70N04 (N:176-361)
06a: PFAM_UcrQ_3l70T01 (T:2-80)
06b: PFAM_UcrQ_3l70T02 (T:2-80)
07a: PFAM_Cytochrom_B_C_3l70P03 (P:259-360)
07b: PFAM_Cytochrom_B_C_3l70P04 (P:259-360)
08a: PFAM_UCR_14kD_3l70S01 (S:10-106)
08b: PFAM_UCR_14kD_3l70S02 (S:10-106)
09a: PFAM_UCR_TM_3l70R03 (R:1-67)
09b: PFAM_UCR_TM_3l70R04 (R:1-67)
10a: PFAM_UCR_UQCRX_QCR9_3l70W01 (W:6-60)
10b: PFAM_UCR_UQCRX_QCR9_3l70W02 (W:6-60)
11a: PFAM_UCR_hinge_3l70U01 (U:14-78)
11b: PFAM_UCR_hinge_3l70U02 (U:14-78)
12a: PFAM_Ubiq_Cytc_red_N_3l70V01 (V:47-57)
12b: PFAM_Ubiq_Cytc_red_N_3l70V02 (V:47-57)
View:
Select:
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Clans
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(
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Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
2heme_cytochrom
(31)
Family
:
Cytochrom_B_N_2
(27)
Gallus gallus (Chicken)
(4)
01a
Cytochrom_B_N_2-3l70P01
P:89-254
01b
Cytochrom_B_N_2-3l70P02
P:89-254
Clan
:
Cytochrome-c
(108)
Family
:
Cytochrom_C1
(24)
Gallus gallus (Chicken)
(4)
02a
Cytochrom_C1-3l70Q01
Q:12-230
02b
Cytochrom_C1-3l70Q02
Q:12-230
Clan
:
ISP-domain
(54)
Family
:
Rieske
(53)
Gallus gallus (Chicken)
(4)
03a
Rieske-3l70R01
R:96-188
03b
Rieske-3l70R02
R:96-188
Clan
:
Peptidase_ME
(35)
Family
:
Peptidase_M16
(29)
Gallus gallus (Chicken)
(4)
04a
Peptidase_M16-3l70O01
O:34-180
04b
Peptidase_M16-3l70O02
O:34-180
04c
Peptidase_M16-3l70N01
N:24-171
04d
Peptidase_M16-3l70N02
N:24-171
Family
:
Peptidase_M16_C
(29)
Gallus gallus (Chicken)
(4)
05a
Peptidase_M16_C-3l70O03
O:185-364
05b
Peptidase_M16_C-3l70O04
O:185-364
05c
Peptidase_M16_C-3l70N03
N:176-361
05d
Peptidase_M16_C-3l70N04
N:176-361
Clan
:
UcrQ-like
(20)
Family
:
UcrQ
(20)
Gallus gallus (Chicken)
(4)
06a
UcrQ-3l70T01
T:2-80
06b
UcrQ-3l70T02
T:2-80
Clan
:
no clan defined [family: Cytochrom_B_C]
(27)
Family
:
Cytochrom_B_C
(27)
Gallus gallus (Chicken)
(4)
07a
Cytochrom_B_C-3l70P03
P:259-360
07b
Cytochrom_B_C-3l70P04
P:259-360
Clan
:
no clan defined [family: UCR_14kD]
(20)
Family
:
UCR_14kD
(20)
Gallus gallus (Chicken)
(4)
08a
UCR_14kD-3l70S01
S:10-106
08b
UCR_14kD-3l70S02
S:10-106
Clan
:
no clan defined [family: UCR_TM]
(20)
Family
:
UCR_TM
(20)
Gallus gallus (Chicken)
(4)
09a
UCR_TM-3l70R03
R:1-67
09b
UCR_TM-3l70R04
R:1-67
Clan
:
no clan defined [family: UCR_UQCRX_QCR9]
(20)
Family
:
UCR_UQCRX_QCR9
(20)
Gallus gallus (Chicken)
(4)
10a
UCR_UQCRX_QCR9-3l70W01
W:6-60
10b
UCR_UQCRX_QCR9-3l70W02
W:6-60
Clan
:
no clan defined [family: UCR_hinge]
(20)
Family
:
UCR_hinge
(20)
Gallus gallus (Chicken)
(4)
11a
UCR_hinge-3l70U01
U:14-78
11b
UCR_hinge-3l70U02
U:14-78
Clan
:
no clan defined [family: Ubiq-Cytc-red_N]
(17)
Family
:
Ubiq-Cytc-red_N
(17)
Gallus gallus (Chicken)
(4)
12a
Ubiq-Cytc-red_N-3l70V01
V:47-57
12b
Ubiq-Cytc-red_N-3l70V02
V:47-57
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