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3L5L
Asym. Unit
Info
Asym.Unit (263 KB)
Biol.Unit 1 (511 KB)
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(1)
Title
:
XENOBIOTIC REDUCTASE A - OXIDIZED
Authors
:
O. Spiegelhauer, H. Dobbek
Date
:
22 Dec 09 (Deposition) - 23 Mar 10 (Release) - 26 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.03
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Tim Barrel, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. Spiegelhauer, S. Mende, F. Dickert, S. H. Knauer, G. M. Ullmann, H. Dobbek
Cysteine As A Modulator Residue In The Active Site Of Xenobiotic Reductase A: A Structural, Thermodynamic And Kinetic Study
J. Mol. Biol. V. 398 66 2010
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: (R,R)-2,3-BUTANEDIOL (BU3a)
1b: (R,R)-2,3-BUTANEDIOL (BU3b)
1c: (R,R)-2,3-BUTANEDIOL (BU3c)
2a: FLAVIN MONONUCLEOTIDE (FMNa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BU3
3
Ligand/Ion
(R,R)-2,3-BUTANEDIOL
2
FMN
1
Ligand/Ion
FLAVIN MONONUCLEOTIDE
3
SO4
7
Ligand/Ion
SULFATE ION
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:346 , ALA A:347 , SER A:348 , HOH A:1716 , HOH A:1825 , HOH A:1827 , HOH A:1843
BINDING SITE FOR RESIDUE SO4 A 1501
02
AC2
SOFTWARE
TYR A:8 , ARG A:18 , HOH A:1609 , HOH A:1614 , HOH A:1690 , HOH A:1911
BINDING SITE FOR RESIDUE SO4 A 1502
03
AC3
SOFTWARE
LYS A:295 , LEU A:296 , PRO A:297 , HOH A:1644 , HOH A:1858 , HOH A:1903 , HOH A:2013
BINDING SITE FOR RESIDUE SO4 A 1503
04
AC4
SOFTWARE
TRP A:278 , GLY A:279 , PRO A:280 , TRP A:302 , HOH A:1671 , HOH A:2042 , HOH A:2081
BINDING SITE FOR RESIDUE SO4 A 1504
05
AC5
SOFTWARE
ASP A:205 , ARG A:209 , ARG A:254 , HOH A:1627 , HOH A:1775 , HOH A:1786
BINDING SITE FOR RESIDUE SO4 A 1505
06
AC6
SOFTWARE
ARG A:111 , ARG A:125 , HOH A:1814
BINDING SITE FOR RESIDUE SO4 A 1506
07
AC7
SOFTWARE
ILE A:66 , HIS A:178 , HIS A:181 , TYR A:183 , FMN A:1401 , HOH A:1769 , HOH A:1918 , HOH A:2007
BINDING SITE FOR RESIDUE SO4 A 1507
08
AC8
SOFTWARE
HIS A:181 , ARG A:231 , SER A:266 , PHE A:269 , TRP A:302 , FMN A:1401 , HOH A:1515 , HOH A:1769
BINDING SITE FOR RESIDUE BU3 A 1508
09
AC9
SOFTWARE
PHE A:189 , SER A:190 , GLU A:191 , ARG A:240 , GLN A:243 , GLU A:247 , HOH A:1551 , HOH A:1823 , HOH A:1949
BINDING SITE FOR RESIDUE BU3 A 1509
10
BC1
SOFTWARE
PRO A:22 , PRO A:23 , MET A:24 , CYS A:25 , ALA A:57 , GLN A:99 , HIS A:178 , HIS A:181 , ARG A:231 , ALA A:301 , TRP A:302 , GLY A:303 , GLY A:325 , ARG A:326 , TRP A:358 , SO4 A:1507 , BU3 A:1508 , HOH A:1545 , HOH A:1591 , HOH A:2007 , HOH A:2077
BINDING SITE FOR RESIDUE FMN A 1401
11
BC2
SOFTWARE
THR A:14 , LYS A:90 , VAL A:95 , GLU A:173 , HOH A:1573
BINDING SITE FOR RESIDUE BU3 A 2176
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3l5la_ (A:)
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Protein Domains
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
FMN-linked oxidoreductases
(290)
Family
:
automated matches
(48)
Protein domain
:
automated matches
(48)
Pseudomonas putida [TaxId: 303]
(12)
1a
d3l5la_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Oxidored_FMN_3l5lA01 (A:3-343)
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Clan
:
TIM_barrel
(694)
Family
:
Oxidored_FMN
(38)
Pseudomonas putida (Arthrobacter siderocapsulatus)
(6)
1a
Oxidored_FMN-3l5lA01
A:3-343
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Chain A
Asymmetric Unit 1
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Asym.Unit (263 KB)
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