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3L4D
Asym. Unit
Info
Asym.Unit (300 KB)
Biol.Unit 1 (292 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF STEROL 14-ALPHA DEMETHYLASE (CYP51) FROM LEISHMANIA INFANTUM IN COMPLEX WITH FLUCONAZOLE
Authors
:
G. I. Lepesheva, T. Y. Hargrove, Z. Wawrzak, M. R. Waterman
Date
:
19 Dec 09 (Deposition) - 29 Dec 09 (Release) - 10 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Sterol 14-Alpha Demethylase, Cyp51, P450, Heme, Oxidoreductase, Monooxygenase, Endoplasmic Reticulum, Transmembrane Protein, Sterol Biosynthesis, Obtusifoliol, Lipids, Membrane, Iron
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. Y. Hargrove, Z. Wawrzak, J. Liu, W. D. Nes, M. R. Waterman, G. I. Lepesheva
Substrate Preferences And Catalytic Parameters Determined B Structural Characteristics Of Sterol 14{Alpha}-Demethylase (Cyp51) From Leishmania Infantum.
J. Biol. Chem. V. 286 26838 2011
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
1b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
1c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
1d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
2a: 3,6,9,12,15-PENTAOXATRICOSAN-1-OL (N8Ea)
3a: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1... (TPFa)
3b: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1... (TPFb)
3c: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1... (TPFc)
3d: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1... (TPFd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
2
N8E
1
Ligand/Ion
3,6,9,12,15-PENTAOXATRICOSAN-1-OL
3
TPF
4
Ligand/Ion
2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:102 , TYR A:115 , ARG A:123 , LEU A:126 , LEU A:133 , ALA A:287 , ALA A:290 , THR A:294 , LEU A:358 , ARG A:360 , GLY A:414 , PHE A:415 , GLY A:416 , HIS A:420 , CYS A:422 , ILE A:423 , GLY A:424 , GLY A:428 , TPF A:490
BINDING SITE FOR RESIDUE HEM A 481
2
AC2
SOFTWARE
PHE A:109 , TYR A:115 , ALA A:286 , PHE A:289 , ALA A:290 , THR A:294 , LEU A:355 , MET A:459 , HEM A:481
BINDING SITE FOR RESIDUE TPF A 490
3
AC3
SOFTWARE
TYR B:102 , TYR B:115 , ARG B:123 , LEU B:126 , LEU B:133 , ALA B:287 , ALA B:290 , THR B:294 , ILE B:349 , LEU B:358 , ARG B:360 , GLY B:414 , PHE B:415 , GLY B:416 , VAL B:419 , HIS B:420 , CYS B:422 , ILE B:423 , GLY B:424 , PHE B:427 , GLY B:428 , TPF B:490
BINDING SITE FOR RESIDUE HEM B 481
4
AC4
SOFTWARE
TYR B:115 , ALA B:286 , PHE B:289 , ALA B:290 , THR B:294 , LEU B:355 , MET B:459 , HEM B:481
BINDING SITE FOR RESIDUE TPF B 490
5
AC5
SOFTWARE
TYR C:102 , TYR C:115 , LEU C:126 , LEU C:133 , ALA C:287 , ALA C:290 , GLY C:291 , THR C:294 , LEU C:358 , ARG C:360 , GLY C:414 , PHE C:415 , GLY C:416 , HIS C:420 , CYS C:422 , ILE C:423 , GLY C:424 , TPF C:490
BINDING SITE FOR RESIDUE HEM C 481
6
AC6
SOFTWARE
PHE C:109 , TYR C:115 , ALA C:286 , PHE C:289 , ALA C:290 , THR C:294 , LEU C:355 , MET C:459 , HEM C:481
BINDING SITE FOR RESIDUE TPF C 490
7
AC7
SOFTWARE
PRO B:221 , PHE C:41 , LEU C:220 , ILE D:45 , LEU D:220
BINDING SITE FOR RESIDUE N8E C 1
8
AC8
SOFTWARE
TYR D:102 , TYR D:115 , ARG D:123 , LEU D:126 , LEU D:133 , ALA D:290 , GLY D:291 , THR D:294 , LEU D:355 , LEU D:358 , ARG D:360 , GLY D:414 , PHE D:415 , GLY D:416 , VAL D:419 , HIS D:420 , LYS D:421 , CYS D:422 , ILE D:423 , GLY D:424 , TPF D:490
BINDING SITE FOR RESIDUE HEM D 481
9
AC9
SOFTWARE
ALA D:286 , PHE D:289 , ALA D:290 , THR D:294 , LEU D:355 , MET D:459 , HEM D:481
BINDING SITE FOR RESIDUE TPF D 490
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3l4da_ (A:)
1b: SCOP_d3l4db_ (B:)
1c: SCOP_d3l4dc_ (C:)
1d: SCOP_d3l4dd_ (D:)
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Protein Domains
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
automated matches
(157)
Protein domain
:
automated matches
(157)
Leishmania infantum [TaxId: 5671]
(1)
1a
d3l4da_
A:
1b
d3l4db_
B:
1c
d3l4dc_
C:
1d
d3l4dd_
D:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_p450_3l4dD01 (D:32-470)
1b: PFAM_p450_3l4dD02 (D:32-470)
1c: PFAM_p450_3l4dD03 (D:32-470)
1d: PFAM_p450_3l4dD04 (D:32-470)
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Clan
:
no clan defined [family: p450]
(161)
Family
:
p450
(161)
Leishmania infantum
(1)
1a
p450-3l4dD01
D:32-470
1b
p450-3l4dD02
D:32-470
1c
p450-3l4dD03
D:32-470
1d
p450-3l4dD04
D:32-470
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Asymmetric Unit 1
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