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3KZW
Asym. Unit
Info
Asym.Unit (890 KB)
Biol.Unit 1 (446 KB)
Biol.Unit 2 (438 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CYTOSOL AMINOPEPTIDASE FROM STAPHYLOCOCCUS AUREUS COL
Authors
:
J. Hattne, I. Dubrovska, A. Halavaty, G. Minasov, P. Scott, L. Shuvalov J. Winsor, Z. Otwinowski, Center For Structural Genomics Of Inf Diseases (Csgid)
Date
:
08 Dec 09 (Deposition) - 12 Jan 10 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: G,H,I,J,K,L (1x)
Keywords
:
Cytosol Aminopeptidase, Aminopeptidase, Hydrolase, Manganese, Metal- Binding, Protease, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
[
close entry info
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Hetero Components
(3, 90)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1aa: CHLORIDE ION (CLaa)
1ab: CHLORIDE ION (CLab)
1ac: CHLORIDE ION (CLac)
1ad: CHLORIDE ION (CLad)
1ae: CHLORIDE ION (CLae)
1af: CHLORIDE ION (CLaf)
1ag: CHLORIDE ION (CLag)
1ah: CHLORIDE ION (CLah)
1ai: CHLORIDE ION (CLai)
1aj: CHLORIDE ION (CLaj)
1ak: CHLORIDE ION (CLak)
1al: CHLORIDE ION (CLal)
1am: CHLORIDE ION (CLam)
1an: CHLORIDE ION (CLan)
1ao: CHLORIDE ION (CLao)
1ap: CHLORIDE ION (CLap)
1aq: CHLORIDE ION (CLaq)
1ar: CHLORIDE ION (CLar)
1as: CHLORIDE ION (CLas)
1at: CHLORIDE ION (CLat)
1au: CHLORIDE ION (CLau)
1av: CHLORIDE ION (CLav)
1aw: CHLORIDE ION (CLaw)
1ax: CHLORIDE ION (CLax)
1ay: CHLORIDE ION (CLay)
1az: CHLORIDE ION (CLaz)
1b: CHLORIDE ION (CLb)
1ba: CHLORIDE ION (CLba)
1bb: CHLORIDE ION (CLbb)
1bc: CHLORIDE ION (CLbc)
1bd: CHLORIDE ION (CLbd)
1be: CHLORIDE ION (CLbe)
1bf: CHLORIDE ION (CLbf)
1bg: CHLORIDE ION (CLbg)
1bh: CHLORIDE ION (CLbh)
1bi: CHLORIDE ION (CLbi)
1bj: CHLORIDE ION (CLbj)
1bk: CHLORIDE ION (CLbk)
1bl: CHLORIDE ION (CLbl)
1bm: CHLORIDE ION (CLbm)
1bn: CHLORIDE ION (CLbn)
1bo: CHLORIDE ION (CLbo)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
1n: CHLORIDE ION (CLn)
1o: CHLORIDE ION (CLo)
1p: CHLORIDE ION (CLp)
1q: CHLORIDE ION (CLq)
1r: CHLORIDE ION (CLr)
1s: CHLORIDE ION (CLs)
1t: CHLORIDE ION (CLt)
1u: CHLORIDE ION (CLu)
1v: CHLORIDE ION (CLv)
1w: CHLORIDE ION (CLw)
1x: CHLORIDE ION (CLx)
1y: CHLORIDE ION (CLy)
1z: CHLORIDE ION (CLz)
2a: SODIUM ION (NAa)
2b: SODIUM ION (NAb)
2c: SODIUM ION (NAc)
2d: SODIUM ION (NAd)
2e: SODIUM ION (NAe)
2f: SODIUM ION (NAf)
2g: SODIUM ION (NAg)
2h: SODIUM ION (NAh)
2i: SODIUM ION (NAi)
2j: SODIUM ION (NAj)
2k: SODIUM ION (NAk)
2l: SODIUM ION (NAl)
2m: SODIUM ION (NAm)
2n: SODIUM ION (NAn)
2o: SODIUM ION (NAo)
2p: SODIUM ION (NAp)
2q: SODIUM ION (NAq)
2r: SODIUM ION (NAr)
2s: SODIUM ION (NAs)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
3c: PHOSPHATE ION (PO4c)
3d: PHOSPHATE ION (PO4d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
67
Ligand/Ion
CHLORIDE ION
2
NA
19
Ligand/Ion
SODIUM ION
3
PO4
4
Ligand/Ion
PHOSPHATE ION
[
close Hetero Component info
]
Sites
(68, 68)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:23 , LEU A:79
BINDING SITE FOR RESIDUE CL A 492
02
AC2
SOFTWARE
ALA A:342 , GLY A:344 , ARG A:345 , LEU A:369
BINDING SITE FOR RESIDUE CL A 495
03
AC3
SOFTWARE
SER A:387 , THR A:446 , SER A:449 , GLY A:450 , HOH A:537 , HOH A:599
BINDING SITE FOR RESIDUE NA A 497
04
AC4
SOFTWARE
ASP A:379 , ALA A:460 , GLY A:461 , THR A:464 , HOH A:552
BINDING SITE FOR RESIDUE NA A 498
05
AC5
SOFTWARE
ASN A:317 , GLU A:318 , ASN B:317 , GLU B:318 , ASN C:317 , GLU C:318
BINDING SITE FOR RESIDUE PO4 A 499
06
AC6
SOFTWARE
LYS B:53 , VAL B:54 , HOH B:522
BINDING SITE FOR RESIDUE CL B 492
07
AC7
SOFTWARE
HIS B:23 , LEU B:79
BINDING SITE FOR RESIDUE CL B 493
08
AC8
SOFTWARE
THR B:328
BINDING SITE FOR RESIDUE CL B 494
09
AC9
SOFTWARE
ALA B:342 , GLY B:344 , ARG B:345 , LEU B:369
BINDING SITE FOR RESIDUE CL B 496
10
BC1
SOFTWARE
ASP B:379 , ALA B:460 , GLY B:461 , THR B:464 , HOH B:540
BINDING SITE FOR RESIDUE NA B 498
11
BC2
SOFTWARE
LYS C:53 , VAL C:54
BINDING SITE FOR RESIDUE CL C 492
12
BC3
SOFTWARE
HIS C:23 , LEU C:79
BINDING SITE FOR RESIDUE CL C 493
13
BC4
SOFTWARE
THR C:328
BINDING SITE FOR RESIDUE CL C 494
14
BC5
SOFTWARE
ALA C:342 , GLY C:344 , ARG C:345 , LEU C:369
BINDING SITE FOR RESIDUE CL C 496
15
BC6
SOFTWARE
SER C:387 , THR C:446 , SER C:449 , GLY C:450 , HOH C:546 , HOH C:550
BINDING SITE FOR RESIDUE NA C 498
16
BC7
SOFTWARE
LYS D:53 , VAL D:54
BINDING SITE FOR RESIDUE CL D 492
17
BC8
SOFTWARE
HIS D:23 , LEU D:79
BINDING SITE FOR RESIDUE CL D 493
18
BC9
SOFTWARE
THR D:328
BINDING SITE FOR RESIDUE CL D 494
19
CC1
SOFTWARE
ALA D:342 , GLY D:344 , ARG D:345 , LEU D:369
BINDING SITE FOR RESIDUE CL D 496
20
CC2
SOFTWARE
SER D:387 , THR D:446 , SER D:449 , GLY D:450 , HOH D:572
BINDING SITE FOR RESIDUE NA D 498
21
CC3
SOFTWARE
ASP D:379 , GLY D:461 , THR D:464
BINDING SITE FOR RESIDUE NA D 499
22
CC4
SOFTWARE
ASN D:317 , GLU D:318 , HOH D:555 , ASN E:317 , GLU E:318 , ASN F:317 , GLU F:318
BINDING SITE FOR RESIDUE PO4 D 500
23
CC5
SOFTWARE
LYS E:53 , VAL E:54
BINDING SITE FOR RESIDUE CL E 492
24
CC6
SOFTWARE
PRO E:21 , HIS E:23 , GLN E:26 , LEU E:79
BINDING SITE FOR RESIDUE CL E 493
25
CC7
SOFTWARE
THR E:328
BINDING SITE FOR RESIDUE CL E 494
26
CC8
SOFTWARE
ALA E:342 , GLY E:344 , ARG E:345 , LEU E:369
BINDING SITE FOR RESIDUE CL E 496
27
CC9
SOFTWARE
SER E:387 , ASN E:388 , THR E:446 , SER E:449 , GLY E:450 , THR E:452 , HOH E:547
BINDING SITE FOR RESIDUE NA E 498
28
DC1
SOFTWARE
ASP E:379 , GLY E:461 , THR E:464
BINDING SITE FOR RESIDUE NA E 499
29
DC2
SOFTWARE
HIS F:23 , LEU F:79
BINDING SITE FOR RESIDUE CL F 492
30
DC3
SOFTWARE
THR F:328
BINDING SITE FOR RESIDUE CL F 493
31
DC4
SOFTWARE
HOH F:563
BINDING SITE FOR RESIDUE CL F 494
32
DC5
SOFTWARE
ALA F:342 , GLY F:344 , ARG F:345 , LEU F:369
BINDING SITE FOR RESIDUE CL F 495
33
DC6
SOFTWARE
ASP F:379 , GLY F:461 , THR F:464
BINDING SITE FOR RESIDUE NA F 497
34
DC7
SOFTWARE
PRO G:21 , GLU G:22 , HIS G:23 , GLY G:77 , LEU G:79
BINDING SITE FOR RESIDUE CL G 492
35
DC8
SOFTWARE
THR G:328
BINDING SITE FOR RESIDUE CL G 493
36
DC9
SOFTWARE
ALA G:342 , GLY G:344 , ARG G:345 , LEU G:369
BINDING SITE FOR RESIDUE CL G 495
37
EC1
SOFTWARE
SER G:387 , THR G:446 , SER G:449 , GLY G:450
BINDING SITE FOR RESIDUE NA G 497
38
EC2
SOFTWARE
ASP G:379 , GLY G:461 , THR G:464
BINDING SITE FOR RESIDUE NA G 498
39
EC3
SOFTWARE
ASN G:317 , GLU G:318 , ASN H:317 , GLU H:318 , ASN I:317 , GLU I:318
BINDING SITE FOR RESIDUE PO4 G 499
40
EC4
SOFTWARE
LYS H:53 , VAL H:54
BINDING SITE FOR RESIDUE CL H 492
41
EC5
SOFTWARE
PRO H:21 , GLU H:22 , HIS H:23 , LEU H:79
BINDING SITE FOR RESIDUE CL H 493
42
EC6
SOFTWARE
THR H:328
BINDING SITE FOR RESIDUE CL H 494
43
EC7
SOFTWARE
ALA H:342 , GLY H:344 , ARG H:345 , LEU H:369
BINDING SITE FOR RESIDUE CL H 496
44
EC8
SOFTWARE
SER H:387 , THR H:446 , SER H:449 , GLY H:450 , HOH H:533
BINDING SITE FOR RESIDUE NA H 498
45
EC9
SOFTWARE
ASP H:379 , GLY H:461 , THR H:464
BINDING SITE FOR RESIDUE NA H 499
46
FC1
SOFTWARE
LYS I:53 , VAL I:54
BINDING SITE FOR RESIDUE CL I 492
47
FC2
SOFTWARE
HIS I:23 , GLN I:26 , LEU I:79
BINDING SITE FOR RESIDUE CL I 493
48
FC3
SOFTWARE
THR I:328
BINDING SITE FOR RESIDUE CL I 494
49
FC4
SOFTWARE
ALA I:342 , GLY I:344 , ARG I:345 , LEU I:369
BINDING SITE FOR RESIDUE CL I 496
50
FC5
SOFTWARE
SER I:387 , ASN I:388 , SER I:449 , GLY I:450 , THR I:452 , HOH I:570
BINDING SITE FOR RESIDUE NA I 498
51
FC6
SOFTWARE
LYS J:53 , VAL J:54
BINDING SITE FOR RESIDUE CL J 492
52
FC7
SOFTWARE
HIS J:23 , GLN J:26 , LEU J:79
BINDING SITE FOR RESIDUE CL J 493
53
FC8
SOFTWARE
THR J:328
BINDING SITE FOR RESIDUE CL J 494
54
FC9
SOFTWARE
ALA J:342 , GLY J:344 , ARG J:345 , LEU J:369
BINDING SITE FOR RESIDUE CL J 495
55
GC1
SOFTWARE
SER J:387 , THR J:446 , SER J:449 , GLY J:450 , THR J:452 , HOH J:533
BINDING SITE FOR RESIDUE NA J 497
56
GC2
SOFTWARE
ASN J:317 , GLU J:318 , ASN K:317 , GLU K:318 , ASN L:317 , GLU L:318
BINDING SITE FOR RESIDUE PO4 J 498
57
GC3
SOFTWARE
LYS K:53 , VAL K:54
BINDING SITE FOR RESIDUE CL K 492
58
GC4
SOFTWARE
GLU K:22 , HIS K:23 , GLY K:77 , LEU K:79
BINDING SITE FOR RESIDUE CL K 493
59
GC5
SOFTWARE
THR K:328
BINDING SITE FOR RESIDUE CL K 494
60
GC6
SOFTWARE
HOH K:595
BINDING SITE FOR RESIDUE CL K 495
61
GC7
SOFTWARE
ALA K:342 , GLY K:344 , ARG K:345 , LEU K:369
BINDING SITE FOR RESIDUE CL K 496
62
GC8
SOFTWARE
SER K:387 , ASN K:388 , SER K:449 , GLY K:450 , THR K:452 , HOH K:524
BINDING SITE FOR RESIDUE NA K 498
63
GC9
SOFTWARE
ASP K:379 , GLY K:461 , THR K:464 , HOH K:509
BINDING SITE FOR RESIDUE NA K 499
64
HC1
SOFTWARE
HIS L:23 , GLN L:26 , LEU L:79
BINDING SITE FOR RESIDUE CL L 492
65
HC2
SOFTWARE
THR L:328
BINDING SITE FOR RESIDUE CL L 493
66
HC3
SOFTWARE
ALA L:342 , GLY L:344 , ARG L:345 , LEU L:369
BINDING SITE FOR RESIDUE CL L 495
67
HC4
SOFTWARE
SER L:387 , ASN L:388 , THR L:446 , SER L:449 , GLY L:450 , THR L:452 , HOH L:511
BINDING SITE FOR RESIDUE NA L 497
68
HC5
SOFTWARE
ASP L:379 , ALA L:460 , GLY L:461 , THR L:464 , HOH L:525
BINDING SITE FOR RESIDUE NA L 498
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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Protein & NOT Site
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