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3KZP
Asym. Unit
Info
Asym.Unit (94 KB)
Biol.Unit 1 (87 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PUTATIVE DIGUANYLATE CYCLASE/PHOSPHODIESTERASE FROM LISTARIA MONOCYTIGENES
Authors
:
M. M. Klimecka, M. Chruszcz, M. D. Zimmerman, M. Kudritska, A. Savchenk A. Edwards, A. Joachimiak, W. Minor, Midwest Center For Structura Genomics (Mcsg)
Date
:
08 Dec 09 (Deposition) - 22 Dec 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Eal-Domain, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. M. Klimecka, M. Chruszcz, M. D. Zimmerman, M. Kudritska, A. Savchenko, A. Edwards, A. Joachimiak, W. Minor
Crystal Structure Of Putative Diguanylate Cyclase/Phosphodiesterase From Listaria Monocytigenes
To Be Published
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Hetero Components
(4, 17)
Info
All Hetero Components
2a: CACODYLATE ION (CACa)
2b: CACODYLATE ION (CACb)
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
3d: CHLORIDE ION (CLd)
3e: CHLORIDE ION (CLe)
3f: CHLORIDE ION (CLf)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
2
Ligand/Ion
CALCIUM ION
2
CAC
2
Ligand/Ion
CACODYLATE ION
3
CL
6
Ligand/Ion
CHLORIDE ION
4
MSE
7
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:222 , ILE A:223 , HOH A:294 , HOH A:343
BINDING SITE FOR RESIDUE CL A 236
02
AC2
SOFTWARE
LEU A:28 , ASN A:78 , HOH A:280 , HOH A:382
BINDING SITE FOR RESIDUE CL A 237
03
AC3
SOFTWARE
SER A:150 , SER B:150
BINDING SITE FOR RESIDUE CL A 238
04
AC4
SOFTWARE
PHE A:176 , ASN A:178 , ILE A:179 , HOH A:371 , MSE B:160
BINDING SITE FOR RESIDUE CL A 239
05
AC5
SOFTWARE
GLU A:25 , ASN A:78 , GLU A:106 , ASP A:147 , HOH A:303 , HOH A:472
BINDING SITE FOR RESIDUE CA A 240
06
AC6
SOFTWARE
ARG A:74 , HOH A:320 , HOH A:470 , HOH A:507
BINDING SITE FOR RESIDUE CAC A 241
07
AC7
SOFTWARE
LEU B:28 , ASN B:78 , HOH B:271
BINDING SITE FOR RESIDUE CL B 236
08
AC8
SOFTWARE
GLU B:25 , ASN B:78 , GLU B:106 , ASP B:147 , HOH B:300 , HOH B:338
BINDING SITE FOR RESIDUE CA B 237
09
AC9
SOFTWARE
PHE B:85 , TYR B:86 , ILE B:87 , HIS B:117
BINDING SITE FOR RESIDUE CL B 238
10
BC1
SOFTWARE
ARG B:74 , HOH B:267
BINDING SITE FOR RESIDUE CAC B 239
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_EAL_3kzpB01 (B:4-232)
1b: PFAM_EAL_3kzpB02 (B:4-232)
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Clans
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)
Clan
:
no clan defined [family: EAL]
(10)
Family
:
EAL
(10)
Listeria monocytogenes
(1)
1a
EAL-3kzpB01
B:4-232
1b
EAL-3kzpB02
B:4-232
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Asymmetric Unit 1
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