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3KYS
Asym. Unit
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Asym.Unit (95 KB)
Biol.Unit 1 (46 KB)
Biol.Unit 2 (47 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN YAP AND TEAD COMPLEX
Authors
:
Z. Li, B. Zhao, P. Wang, F. Chen, Z. Dong, H. Yang, K. L. Guan, Y. Xu
Date
:
07 Dec 09 (Deposition) - 23 Feb 10 (Release) - 23 Feb 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Immunoglobulin-Like Fold, Activator, Disease Mutation, Dna- Binding, Nucleus, Phosphoprotein, Transcription, Transcription Regulation, Transcription-Protein Binding Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Li, B. Zhao, P. Wang, F. Chen, Z. Dong, H. Yang, K. L. Guan, Y. Xu
Structural Insights Into The Yap And Tead Complex
Genes Dev. V. 24 235 2010
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
1b: BETA-MERCAPTOETHANOL (BMEb)
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Label:
No.
Name
Count
Type
Full Name
1
BME
2
Ligand/Ion
BETA-MERCAPTOETHANOL
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:98 , THR A:309 , CYS A:344
BINDING SITE FOR RESIDUE BME A 700
2
AC2
SOFTWARE
HOH C:104 , MET C:343 , CYS C:344 , MET C:347
BINDING SITE FOR RESIDUE BME C 700
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_031530 (Y406H, chain A/C, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_031530
Y
421
H
TEAD1_HUMAN
Disease (SCRA)
11567847
A/C
Y
406
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
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Exons
(1, 2)
Info
All Exons
Exon 1.1a (B:50-100 | D:52-100)
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All Exon Boundaries
1: Boundary -/1.1a
2: Boundary 1.1a/1.3
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000282441
1a
ENSE00002151482
chr11:
101981192-101981900
709
YAP1_HUMAN
1-107
107
2
B:50-100
D:52-100
51
49
1.3
ENST00000282441
3
ENSE00001105700
chr11:
101984875-101985125
251
YAP1_HUMAN
108-191
84
0
-
-
1.4
ENST00000282441
4
ENSE00001105694
chr11:
102033187-102033302
116
YAP1_HUMAN
191-230
40
0
-
-
1.5a
ENST00000282441
5a
ENSE00001311988
chr11:
102056749-102056862
114
YAP1_HUMAN
230-268
39
0
-
-
1.6a
ENST00000282441
6a
ENSE00001292600
chr11:
102076624-102076805
182
YAP1_HUMAN
268-328
61
0
-
-
1.7
ENST00000282441
7
ENSE00001321313
chr11:
102080248-102080295
48
YAP1_HUMAN
329-344
16
0
-
-
1.8
ENST00000282441
8
ENSE00001105702
chr11:
102094353-102094483
131
YAP1_HUMAN
345-388
44
0
-
-
1.10
ENST00000282441
10
ENSE00001105705
chr11:
102098200-102098312
113
YAP1_HUMAN
388-426
39
0
-
-
1.11f
ENST00000282441
11f
ENSE00001345991
chr11:
102100433-102104154
3722
YAP1_HUMAN
426-504
79
0
-
-
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SCOP Domains
(0, 0)
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All SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_TEA_3kysC01 (C:194-403)
1b: PFAM_TEA_3kysC02 (C:194-403)
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Clans
(
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(
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Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: TEA]
(3)
Family
:
TEA
(3)
Homo sapiens (Human)
(2)
1a
TEA-3kysC01
C:194-403
1b
TEA-3kysC02
C:194-403
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Asym.Unit (95 KB)
Header - Asym.Unit
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