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3KYM
Biol. Unit 7
Info
Asym.Unit (537 KB)
Biol.Unit 1 (76 KB)
Biol.Unit 2 (76 KB)
Biol.Unit 3 (75 KB)
Biol.Unit 4 (76 KB)
Biol.Unit 5 (76 KB)
Biol.Unit 6 (75 KB)
Biol.Unit 7 (75 KB)
Biol.Unit 8 (75 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF LI33 IGG2 DI-FAB
Authors
:
L. F. Silvian, R. B. Pepinsky, L. Walus
Date
:
06 Dec 09 (Deposition) - 16 Mar 10 (Release) - 19 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.62
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: I,J (1x)
Biol. Unit 6: K,L (1x)
Biol. Unit 7: M,N (1x)
Biol. Unit 8: O,P (1x)
Keywords
:
Igg2 Monoclonal Anti-Lingo, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. B. Pepinsky, L. Silvian, S. A. Berkowitz, G. Farrington, A. Lugovskoy, L. Walus, J. Eldredge, A. Capili, S. Mi, C. Graff, E. Garber
Improving The Solubility Of Anti-Lingo-1 Monoclonal Antibody Li33 By Isotype Switching And Targeted Mutagenesis.
Protein Sci. V. 19 954 2010
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d3kyma1 (A:1-107)
1b: SCOP_d3kymc1 (C:1-107)
1c: SCOP_d3kyme1 (E:1-107)
1d: SCOP_d3kymg1 (G:1-107)
1e: SCOP_d3kymi1 (I:1-107)
1f: SCOP_d3kymk1 (K:1-107)
1g: SCOP_d3kymm1 (M:1-107)
1h: SCOP_d3kymo1 (O:1-107)
2a: SCOP_d3kyma2 (A:108-213)
2b: SCOP_d3kymc2 (C:108-213)
2c: SCOP_d3kyme2 (E:108-213)
2d: SCOP_d3kymg2 (G:108-213)
2e: SCOP_d3kymi2 (I:108-213)
2f: SCOP_d3kymk2 (K:108-212)
2g: SCOP_d3kymm2 (M:108-208)
2h: SCOP_d3kymo2 (O:108-213)
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Protein Domains
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)
Organisms
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)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
automated matches
(864)
Protein domain
:
automated matches
(864)
Human (Homo sapiens) [TaxId: 9606]
(448)
1a
d3kyma1
A:1-107
1b
d3kymc1
C:1-107
1c
d3kyme1
E:1-107
1d
d3kymg1
G:1-107
1e
d3kymi1
I:1-107
1f
d3kymk1
K:1-107
1g
d3kymm1
M:1-107
1h
d3kymo1
O:1-107
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
automated matches
(652)
Human (Homo sapiens) [TaxId: 9606]
(334)
2a
d3kyma2
A:108-213
2b
d3kymc2
C:108-213
2c
d3kyme2
E:108-213
2d
d3kymg2
G:108-213
2e
d3kymi2
I:108-213
2f
d3kymk2
K:108-212
2g
d3kymm2
M:108-208
2h
d3kymo2
O:108-213
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CATH Domains
(1, 24)
Info
all CATH domains
1a: CATH_3kymC02 (C:109-213)
1b: CATH_3kymE02 (E:109-213)
1c: CATH_3kymG02 (G:109-213)
1d: CATH_3kymI02 (I:109-213)
1e: CATH_3kymO02 (O:109-213)
1f: CATH_3kymA02 (A:109-211)
1g: CATH_3kymM02 (M:109-208)
1h: CATH_3kymK02 (K:109-209)
1i: CATH_3kymB02 (B:120-220)
1j: CATH_3kymD02 (D:120-220)
1k: CATH_3kymF02 (F:120-219)
1l: CATH_3kymH02 (H:120-219)
1m: CATH_3kymJ02 (J:120-219)
1n: CATH_3kymL02 (L:120-219)
1o: CATH_3kymN02 (N:120-219)
1p: CATH_3kymP02 (P:120-219)
1q: CATH_3kymB01 (B:1-119)
1r: CATH_3kymD01 (D:1-119)
1s: CATH_3kymF01 (F:1-119)
1t: CATH_3kymH01 (H:1-119)
1u: CATH_3kymJ01 (J:1-119)
1v: CATH_3kymL01 (L:1-119)
1w: CATH_3kymN01 (N:1-119)
1x: CATH_3kymP01 (P:1-119)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Homo sapiens. Organism_taxid: 9606.
(14)
1a
3kymC02
C:109-213
1b
3kymE02
E:109-213
1c
3kymG02
G:109-213
1d
3kymI02
I:109-213
1e
3kymO02
O:109-213
1f
3kymA02
A:109-211
1g
3kymM02
M:109-208
1h
3kymK02
K:109-209
1i
3kymB02
B:120-220
1j
3kymD02
D:120-220
1k
3kymF02
F:120-219
1l
3kymH02
H:120-219
1m
3kymJ02
J:120-219
1n
3kymL02
L:120-219
1o
3kymN02
N:120-219
1p
3kymP02
P:120-219
1q
3kymB01
B:1-119
1r
3kymD01
D:1-119
1s
3kymF01
F:1-119
1t
3kymH01
H:1-119
1u
3kymJ01
J:1-119
1v
3kymL01
L:1-119
1w
3kymN01
N:1-119
1x
3kymP01
P:1-119
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Pfam Domains
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Show PDB file:
Asym.Unit (537 KB)
Header - Asym.Unit
Biol.Unit 1 (76 KB)
Header - Biol.Unit 1
Biol.Unit 2 (76 KB)
Header - Biol.Unit 2
Biol.Unit 3 (75 KB)
Header - Biol.Unit 3
Biol.Unit 4 (76 KB)
Header - Biol.Unit 4
Biol.Unit 5 (76 KB)
Header - Biol.Unit 5
Biol.Unit 6 (75 KB)
Header - Biol.Unit 6
Biol.Unit 7 (75 KB)
Header - Biol.Unit 7
Biol.Unit 8 (75 KB)
Header - Biol.Unit 8
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