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3KWC
Asym. Unit
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Asym.Unit (220 KB)
Biol.Unit 1 (104 KB)
Biol.Unit 2 (105 KB)
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(1)
Title
:
OXIDIZED, ACTIVE STRUCTURE OF THE BETA-CARBOXYSOMAL GAMMA-CARBONIC ANHYDRASE, CCMM
Authors
:
M. S. Kimber, S. E. Castel, K. L. Pena
Date
:
01 Dec 09 (Deposition) - 23 Feb 10 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Left-Handed Beta Helix, Gamma Carbonic Anhydrase, Disulfide Bond Dependent Activity, Carboxysome, Lyase, Protein Binding, Photosynthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. L. Pena, S. E. Castel, C. De Araujo, G. S. Espie, M. S. Kimber
Structural Basis Of The Oxidative Activation Of The Carboxysomal {Gamma}-Carbonic Anhydrase, Ccmm.
Proc. Natl. Acad. Sci. Usa V. 107 2455 2010
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Hetero Components
(3, 15)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: ISOPROPYL ALCOHOL (IPAa)
2b: ISOPROPYL ALCOHOL (IPAb)
2c: ISOPROPYL ALCOHOL (IPAc)
2d: ISOPROPYL ALCOHOL (IPAd)
2e: ISOPROPYL ALCOHOL (IPAe)
2f: ISOPROPYL ALCOHOL (IPAf)
2g: ISOPROPYL ALCOHOL (IPAg)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
IPA
7
Ligand/Ion
ISOPROPYL ALCOHOL
3
ZN
6
Ligand/Ion
ZINC ION
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:102 , IPA A:301 , HIS B:75 , HIS B:107 , HOH B:874
BINDING SITE FOR RESIDUE ZN B 300
02
AC2
SOFTWARE
GLN A:69 , PHE A:120 , PHE A:177 , LEU B:77 , ZN B:300 , HOH B:874
BINDING SITE FOR RESIDUE IPA A 301
03
AC3
SOFTWARE
HIS B:102 , IPA B:301 , HIS C:75 , HIS C:107 , HOH C:616
BINDING SITE FOR RESIDUE ZN C 300
04
AC4
SOFTWARE
GLN B:69 , PHE B:120 , ZN C:300 , HOH C:616
BINDING SITE FOR RESIDUE IPA B 301
05
AC5
SOFTWARE
HIS A:75 , HIS A:107 , HOH A:244 , HIS C:102 , HOH C:832
BINDING SITE FOR RESIDUE ZN A 300
06
AC6
SOFTWARE
HIS D:102 , HOH D:787 , HIS E:75 , HIS E:107 , HOH E:258
BINDING SITE FOR RESIDUE ZN E 300
07
AC7
SOFTWARE
HIS E:102 , IPA E:301 , HIS F:75 , HIS F:107 , HOH F:235
BINDING SITE FOR RESIDUE ZN F 300
08
AC8
SOFTWARE
PHE E:120 , PHE E:177 , VAL E:181 , LEU F:77 , HOH F:235 , ZN F:300
BINDING SITE FOR RESIDUE IPA E 301
09
AC9
SOFTWARE
HIS D:75 , HIS D:107 , HOH D:500 , HIS F:102 , HOH F:491
BINDING SITE FOR RESIDUE ZN D 300
10
BC1
SOFTWARE
ARG D:121 , ARG E:121 , ARG F:121 , HOH F:712
BINDING SITE FOR RESIDUE CL D 210
11
BC2
SOFTWARE
ARG A:121 , ARG B:121 , ARG C:121
BINDING SITE FOR RESIDUE CL A 210
12
BC3
SOFTWARE
PRO E:153 , ARG E:166 , HOH E:311
BINDING SITE FOR RESIDUE IPA E 210
13
BC4
SOFTWARE
TYR E:27 , HIS E:29 , SER E:30 , HOH E:875 , ASN F:33
BINDING SITE FOR RESIDUE IPA E 211
14
BC5
SOFTWARE
TYR A:27 , HIS A:29 , SER A:30 , PHE A:31 , ASN B:33 , ILE B:35
BINDING SITE FOR RESIDUE IPA A 211
15
BC6
SOFTWARE
ASN A:33 , ILE A:35 , TYR C:27 , HIS C:29 , SER C:30 , HOH C:220
BINDING SITE FOR RESIDUE IPA C 210
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3kwca_ (A:)
1b: SCOP_d3kwcb_ (B:)
1c: SCOP_d3kwcc_ (C:)
1d: SCOP_d3kwcd_ (D:)
1e: SCOP_d3kwce_ (E:)
1f: SCOP_d3kwcf_ (F:)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Single-stranded left-handed beta-helix
(154)
Superfamily
:
Trimeric LpxA-like enzymes
(147)
Family
:
automated matches
(55)
Protein domain
:
automated matches
(55)
Thermosynechococcus elongatus [TaxId: 197221]
(3)
1a
d3kwca_
A:
1b
d3kwcb_
B:
1c
d3kwcc_
C:
1d
d3kwcd_
D:
1e
d3kwce_
E:
1f
d3kwcf_
F:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Hexapep_3kwcF01 (F:91-126)
1b: PFAM_Hexapep_3kwcF02 (F:91-126)
1c: PFAM_Hexapep_3kwcF03 (F:91-126)
1d: PFAM_Hexapep_3kwcF04 (F:91-126)
1e: PFAM_Hexapep_3kwcF05 (F:91-126)
1f: PFAM_Hexapep_3kwcF06 (F:91-126)
1g: PFAM_Hexapep_3kwcF07 (F:91-126)
1h: PFAM_Hexapep_3kwcF08 (F:91-126)
1i: PFAM_Hexapep_3kwcF09 (F:91-126)
1j: PFAM_Hexapep_3kwcF10 (F:91-126)
1k: PFAM_Hexapep_3kwcF11 (F:91-126)
1l: PFAM_Hexapep_3kwcF12 (F:91-126)
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(
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(
)
Clan
:
no clan defined [family: Hexapep]
(52)
Family
:
Hexapep
(52)
Thermosynechococcus elongatus (strain BP-1)
(2)
1a
Hexapep-3kwcF01
F:91-126
1b
Hexapep-3kwcF02
F:91-126
1c
Hexapep-3kwcF03
F:91-126
1d
Hexapep-3kwcF04
F:91-126
1e
Hexapep-3kwcF05
F:91-126
1f
Hexapep-3kwcF06
F:91-126
1g
Hexapep-3kwcF07
F:91-126
1h
Hexapep-3kwcF08
F:91-126
1i
Hexapep-3kwcF09
F:91-126
1j
Hexapep-3kwcF10
F:91-126
1k
Hexapep-3kwcF11
F:91-126
1l
Hexapep-3kwcF12
F:91-126
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Asym.Unit (220 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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