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Asym. Unit
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Asym.Unit (134 KB)
Biol.Unit 1 (64 KB)
Biol.Unit 2 (65 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HUMAN SRP19/S-DOMAIN SRP RNA COMPLEX
Authors
:
K. Wild, G. Bange, G. Bozkurt, I. Sinning
Date
:
26 Nov 09 (Deposition) - 16 Feb 10 (Release) - 06 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Ribonucleoprotein Complex, Rna-Rna Tertiary Interactions, Asymmetric Loop, Rna-Binding, Signal Recognition Particle, Rna-Rna Binding Protein Complex
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Reference
:
K. Wild, G. Bange, G. Bozkurt, B. Segnitz, A. Hendricks, I. Sinning
Structural Insights Into The Assembly Of The Human And Archaeal Signal Recognition Particles.
Acta Crystallogr. , Sect. D V. 66 295 2010
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
2a: POTASSIUM ION (Ka)
2b: POTASSIUM ION (Kb)
2c: POTASSIUM ION (Kc)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
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No.
Name
Count
Type
Full Name
1
GDP
1
Mod. Nucleotide
GUANOSINE-5'-DIPHOSPHATE
2
K
3
Ligand/Ion
POTASSIUM ION
3
MG
3
Ligand/Ion
MAGNESIUM ION
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Sites
(4, 4)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN D:59 , GLN D:88 , CYS D:94
BINDING SITE FOR RESIDUE K D 129
2
AC2
SOFTWARE
G C:193 , G C:194
BINDING SITE FOR RESIDUE MG C 4
3
AC3
SOFTWARE
A C:139
BINDING SITE FOR RESIDUE MG C 5
4
AC4
SOFTWARE
G A:155 , G A:156
BINDING SITE FOR RESIDUE MG A 6
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SAPs(SNPs)/Variants
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Exons
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SCOP Domains
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3ktvB00 (B:10-115)
1b: CATH_3ktvD00 (D:8-115)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phenylalanyl-tRNA Synthetase; Chain B, domain 1
(22)
Homologous Superfamily
:
SRP19
(8)
Human (Homo sapiens)
(2)
1a
3ktvB00
B:10-115
1b
3ktvD00
D:8-115
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_SRP19_3ktvD01 (D:16-115)
1b: PFAM_SRP19_3ktvD02 (D:16-115)
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Clan
:
no clan defined [family: SRP19]
(9)
Family
:
SRP19
(9)
Homo sapiens (Human)
(3)
1a
SRP19-3ktvD01
D:16-115
1b
SRP19-3ktvD02
D:16-115
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Asymmetric Unit 1
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Asym.Unit (134 KB)
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