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3KSY
Biol. Unit 1
Info
Asym.Unit (234 KB)
Biol.Unit 1 (229 KB)
Biol.Unit 2 (455 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HISTONE DOMAIN, DH-PH UNIT, AND CATALYTIC UNIT OF THE RAS ACTIVATOR SON OF SEVENLESS (SOS)
Authors
:
J. Gureasko, O. Kuchment, J. Kuriyan
Date
:
24 Nov 09 (Deposition) - 16 Feb 10 (Release) - 23 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.18
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Ras, Sos, Ras Activator, Son Of Sevenless, Disease Mutation, Guanine-Nucleotide Releasing Factor, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Gureasko, O. Kuchment, D. L. Makino, H. Sondermann, D. Bar-Sagi, J. Kuriyan
Role Of The Histone Domain In The Autoinhibition And Activation Of The Ras Activator Son Of Sevenless.
Proc. Natl. Acad. Sci. Usa V. 107 3430 2010
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Hetero Components
(0, 0)
Info
All Hetero Components
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Label:
Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(46, 46)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_066031 (T37A, chain A, )
02: VAR_066032 (P102R, chain A, )
03: VAR_030423 (E108K, chain A, )
04: VAR_066033 (P112R, chain A, )
05: VAR_066034 (K170E, chain A, )
06: VAR_066035 (I252T, chain A, )
07: VAR_030424 (T266K, chain A, )
08: VAR_030425 (M269R, chain A, )
09: VAR_064504 (M269T, chain A, )
10: VAR_030426 (D309Y, chain A, )
11: VAR_030427 (Y337C, chain A, )
12: VAR_066036 (T378A, chain A, )
13: VAR_066037 (M422V, chain A, )
14: VAR_066038 (E424K, chain A, )
15: VAR_030428 (W432R, chain A, )
16: VAR_030429 (E433K, chain A, )
17: VAR_066041 (G434K, chain A, )
18: VAR_030430 (G434R, chain A, )
19: VAR_066042 (I437T, chain A, )
20: VAR_030431 (C441Y, chain A, )
21: VAR_064505 (Q477R, chain A, )
22: VAR_066043 (P478L, chain A, )
23: VAR_066044 (P478R, chain A, )
24: VAR_066045 (G482R, chain A, )
25: VAR_066046 (L490R, chain A, )
26: VAR_064506 (R497Q, chain A, )
27: VAR_030432 (S548R, chain A, )
28: VAR_066047 (T549K, chain A, )
29: VAR_030433 (L550P, chain A, )
30: VAR_030434 (R552G, chain A, )
31: VAR_030435 (R552K, chain A, )
32: VAR_066048 (R552M, chain A, )
33: VAR_030436 (R552S, chain A, )
34: VAR_066049 (R552T, chain A, )
35: VAR_066051 (L569V, chain A, )
36: VAR_066052 (F623I, chain A, )
37: VAR_030437 (P655L, chain A, )
38: VAR_030438 (Y702H, chain A, )
39: VAR_066053 (A708T, chain A, )
40: VAR_030439 (W729L, chain A, )
41: VAR_030440 (I733F, chain A, )
42: VAR_066054 (I784T, chain A, )
43: VAR_030441 (E846K, chain A, )
44: VAR_066055 (P894R, chain A, )
45: VAR_030442 (Q977R, chain A, )
46: VAR_066056 (N1011S, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_066031
T
37
A
SOS1_HUMAN
Polymorphism
150565592
A
T
37
A
02
UniProt
VAR_066032
P
102
R
SOS1_HUMAN
Disease (NS4)
---
A
P
102
R
03
UniProt
VAR_030423
E
108
K
SOS1_HUMAN
Disease (NS4)
---
A
E
108
K
04
UniProt
VAR_066033
P
112
R
SOS1_HUMAN
Disease (NS4)
---
A
P
112
R
05
UniProt
VAR_066034
K
170
E
SOS1_HUMAN
Disease (NS4)
---
A
K
170
E
06
UniProt
VAR_066035
I
252
T
SOS1_HUMAN
Disease (NS4)
142094234
A
I
252
T
07
UniProt
VAR_030424
T
266
K
SOS1_HUMAN
Disease (NS4)
137852812
A
T
266
K
08
UniProt
VAR_030425
M
269
R
SOS1_HUMAN
Disease (NS4)
137852813
A
M
269
R
09
UniProt
VAR_064504
M
269
T
SOS1_HUMAN
Disease (NS4)
---
A
M
269
T
10
UniProt
VAR_030426
D
309
Y
SOS1_HUMAN
Disease (NS4)
---
A
D
309
Y
11
UniProt
VAR_030427
Y
337
C
SOS1_HUMAN
Disease (NS4)
---
A
Y
337
C
12
UniProt
VAR_066036
T
378
A
SOS1_HUMAN
Unclassified
---
A
T
378
A
13
UniProt
VAR_066037
M
422
V
SOS1_HUMAN
Disease (NS4)
---
A
M
422
V
14
UniProt
VAR_066038
E
424
K
SOS1_HUMAN
Disease (NS4)
---
A
E
424
K
15
UniProt
VAR_030428
W
432
R
SOS1_HUMAN
Disease (NS4)
---
A
W
432
R
16
UniProt
VAR_030429
E
433
K
SOS1_HUMAN
Disease (NS4)
---
A
E
433
K
17
UniProt
VAR_066041
G
434
K
SOS1_HUMAN
Disease (NS4)
---
A
G
434
K
18
UniProt
VAR_030430
G
434
R
SOS1_HUMAN
Disease (NS4)
---
A
G
434
R
19
UniProt
VAR_066042
I
437
T
SOS1_HUMAN
Disease (NS4)
---
A
I
437
T
20
UniProt
VAR_030431
C
441
Y
SOS1_HUMAN
Disease (NS4)
---
A
C
441
Y
21
UniProt
VAR_064505
Q
477
R
SOS1_HUMAN
Disease (NS4)
---
A
Q
477
R
22
UniProt
VAR_066043
P
478
L
SOS1_HUMAN
Unclassified
---
A
P
478
L
23
UniProt
VAR_066044
P
478
R
SOS1_HUMAN
Disease (NS4)
---
A
P
478
R
24
UniProt
VAR_066045
G
482
R
SOS1_HUMAN
Disease (NS4)
---
A
G
482
R
25
UniProt
VAR_066046
L
490
R
SOS1_HUMAN
Disease (NS4)
---
A
L
490
R
26
UniProt
VAR_064506
R
497
Q
SOS1_HUMAN
Disease (NS4)
---
A
R
497
Q
27
UniProt
VAR_030432
S
548
R
SOS1_HUMAN
Disease (NS4)
---
A
S
548
R
28
UniProt
VAR_066047
T
549
K
SOS1_HUMAN
Disease (NS4)
---
A
T
549
K
29
UniProt
VAR_030433
L
550
P
SOS1_HUMAN
Disease (NS4)
---
A
L
550
P
30
UniProt
VAR_030434
R
552
G
SOS1_HUMAN
Disease (NS4)
137852814
A
R
552
G
31
UniProt
VAR_030435
R
552
K
SOS1_HUMAN
Disease (NS4)
---
A
R
552
K
32
UniProt
VAR_066048
R
552
M
SOS1_HUMAN
Disease (NS4)
---
A
R
552
M
33
UniProt
VAR_030436
R
552
S
SOS1_HUMAN
Disease (NS4)
---
A
R
552
S
34
UniProt
VAR_066049
R
552
T
SOS1_HUMAN
Disease (NS4)
---
A
R
552
T
35
UniProt
VAR_066051
L
569
V
SOS1_HUMAN
Polymorphism
---
A
L
569
V
36
UniProt
VAR_066052
F
623
I
SOS1_HUMAN
Disease (NS4)
---
A
F
623
I
37
UniProt
VAR_030437
P
655
L
SOS1_HUMAN
Polymorphism
56219475
A
P
655
L
38
UniProt
VAR_030438
Y
702
H
SOS1_HUMAN
Disease (NS4)
---
A
Y
702
H
39
UniProt
VAR_066053
A
708
T
SOS1_HUMAN
Polymorphism
140811086
A
A
708
T
40
UniProt
VAR_030439
W
729
L
SOS1_HUMAN
Disease (NS4)
---
A
W
729
L
41
UniProt
VAR_030440
I
733
F
SOS1_HUMAN
Disease (NS4)
---
A
I
733
F
42
UniProt
VAR_066054
I
784
T
SOS1_HUMAN
Unclassified
---
A
I
784
T
43
UniProt
VAR_030441
E
846
K
SOS1_HUMAN
Disease (NS4)
---
A
E
846
K
44
UniProt
VAR_066055
P
894
R
SOS1_HUMAN
Disease (NS4)
---
A
P
894
R
45
UniProt
VAR_030442
Q
977
R
SOS1_HUMAN
Polymorphism
---
A
Q
977
R
46
UniProt
VAR_066056
N
1011
S
SOS1_HUMAN
Polymorphism
8192671
A
N
1011
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(5, 5)
Info
All PROSITE Patterns/Profiles
1: DH_2 (A:200-390)
2: PH_DOMAIN (A:443-546)
3: RASGEF_NTER (A:597-741)
4: RASGEF_CAT (A:780-1019)
5: RASGEF (A:927-960)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DH_2
PS50010
Dbl homology (DH) domain profile.
SOS1_HUMAN
200-390
1
A:200-390
2
PH_DOMAIN
PS50003
PH domain profile.
SOS1_HUMAN
443-546
1
A:443-546
3
RASGEF_NTER
PS50212
Ras guanine-nucleotide exchange factors N-terminal domain profile.
SOS1_HUMAN
597-741
1
A:597-741
4
RASGEF_CAT
PS50009
Ras guanine-nucleotide exchange factors catalytic domain profile.
SOS1_HUMAN
780-1019
1
A:780-1019
5
RASGEF
PS00720
Ras Guanine-nucleotide exchange factors domain signature.
SOS1_HUMAN
927-960
1
A:927-960
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Exons
(0, 0)
Info
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SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(5, 5)
Info
all PFAM domains
1a: PFAM_Histone_3ksyA01 (A:97-169)
2a: PFAM_PH_3ksyA02 (A:444-546)
3a: PFAM_RasGEF_3ksyA03 (A:777-963)
4a: PFAM_RasGEF_N_3ksyA04 (A:600-717)
5a: PFAM_RhoGEF_3ksyA05 (A:208-389)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Histone
(49)
Family
:
Histone
(46)
Homo sapiens (Human)
(6)
1a
Histone-3ksyA01
A:97-169
Clan
:
PH
(111)
Family
:
PH
(71)
Homo sapiens (Human)
(42)
2a
PH-3ksyA02
A:444-546
Clan
:
no clan defined [family: RasGEF]
(8)
Family
:
RasGEF
(8)
Homo sapiens (Human)
(8)
3a
RasGEF-3ksyA03
A:777-963
Clan
:
no clan defined [family: RasGEF_N]
(7)
Family
:
RasGEF_N
(7)
Homo sapiens (Human)
(7)
4a
RasGEF_N-3ksyA04
A:600-717
Clan
:
no clan defined [family: RhoGEF]
(22)
Family
:
RhoGEF
(22)
Homo sapiens (Human)
(16)
5a
RhoGEF-3ksyA05
A:208-389
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Asym.Unit (234 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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