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3KNQ
Asym. Unit
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Asym.Unit (135 KB)
Biol.Unit 1 (67 KB)
Biol.Unit 2 (65 KB)
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(1)
Title
:
BETA TURN OPTIMIZATION OF THE GENE-3-PROTEIN OF FILAMENTOUS PHAGE FD
Authors
:
R. P Jakob, H. Dobbek
Date
:
12 Nov 09 (Deposition) - 24 Nov 09 (Release) - 09 Jun 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.13
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Filamentous Phage, Beta Turn, Rational Design, Protein Stabilization, Protein Engineering, Protein Folding, Disulfide Bond, Phage Recognition, Transmembrane, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. P. Jakob, B. K. Zierer, U. Weininger, S. D. Hofmann, S. H. Lorenz, J. Balbach, H. Dobbek, F. X. Schmid
Elimination Of A Cis-Proline-Containing Loop And Turn Optimization Stabilizes A Protein And Accelerates Its Folding.
J. Mol. Biol. V. 399 331 2010
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Hetero Components
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Sites
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Exons
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SCOP Domains
(1, 3)
Info
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1a: SCOP_d3knqa1 (A:5-67)
1b: SCOP_d3knqa2 (A:90-215)
1c: SCOP_d3knqb1 (B:11-67)
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Class
:
All beta proteins
(24004)
Fold
:
N-terminal domains of the minor coat protein g3p
(10)
Superfamily
:
N-terminal domains of the minor coat protein g3p
(10)
Family
:
automated matches
(5)
Protein domain
:
automated matches
(5)
Enterobacteria phage [TaxId: 10864]
(1)
1a
d3knqa1
A:5-67
1b
d3knqa2
A:90-215
1c
d3knqb1
B:11-67
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_3knqA02 (A:102-202)
1b: CATH_3knqB02 (B:102-202)
2a: CATH_3knqA01 (A:5-101,A:203-212)
2b: CATH_3knqB01 (B:11-101,B:203-212)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Minor Coat Protein; domain 2
(4)
Homologous Superfamily
:
Minor Coat Protein; Domain 2
(4)
Bacteriophage fd (Enterobacteria phage fd)
(1)
1a
3knqA02
A:102-202
1b
3knqB02
B:102-202
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
Phage FD Coat Protein, Membrane penetration domain
(6)
Homologous Superfamily
:
Phage FD Coat Protein,Membrane penetration domain
(6)
Bacteriophage fd (Enterobacteria phage fd)
(1)
2a
3knqA01
A:5-101,A:203-212
2b
3knqB01
B:11-101,B:203-212
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Pfam Domains
(1, 4)
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all PFAM domains
1a: PFAM_Phage_Coat_A_3knqB01 (B:90-155)
1b: PFAM_Phage_Coat_A_3knqB02 (B:90-155)
1c: PFAM_Phage_Coat_A_3knqB03 (B:90-155)
1d: PFAM_Phage_Coat_A_3knqB04 (B:90-155)
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Clan
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no clan defined [family: Phage_Coat_A]
(4)
Family
:
Phage_Coat_A
(4)
Enterobacteria phage fd (Bacteriophage fd)
(1)
1a
Phage_Coat_A-3knqB01
B:90-155
1b
Phage_Coat_A-3knqB02
B:90-155
1c
Phage_Coat_A-3knqB03
B:90-155
1d
Phage_Coat_A-3knqB04
B:90-155
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Asym.Unit (135 KB)
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