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3KN4
Biol. Unit 1
Info
Asym.Unit (115 KB)
Biol.Unit 1 (214 KB)
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(1)
Title
:
AGAO 6-PHENYL-2,3-HEXADIENYLAMINE COMPLEX
Authors
:
Y. H. Nguyen, K. E. Ernberg, J. M. Guss
Date
:
12 Nov 09 (Deposition) - 27 Oct 10 (Release) - 27 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Cuao, Amine Oxidase, Arthrobacter Globiformis, Copper Containing, Metal-Binding, Oxidoreductase, Tpq, Quinone, Inhibition, 6-Phenyl-2, 3-Hexadienylamine, Disulfide Bond
(Keyword Search:
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Reference
:
Y. H. Nguyen, K. E. Ernberg, J. M. Guss
Agao 6-Phenyl-2, 3-Hexadienylamine Complex
To Be Published
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Hetero Components
(3, 26)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
3a: SODIUM ION (NAa)
4a: 2-HYDROXY-5-{[(1E)-1-(2-OXOETHYLID... (P3Qa)
5a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CU
-1
Ligand/Ion
COPPER (II) ION
2
GOL
22
Ligand/Ion
GLYCEROL
3
NA
-1
Ligand/Ion
SODIUM ION
4
P3Q
2
Mod. Amino Acid
2-HYDROXY-5-{[(1E)-1-(2-OXOETHYLIDENE)-4-PHENYLBUTYL]AMINO}-L-TYROSINE
5
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:431 , HIS A:433 , HIS A:592 , HOH A:759
BINDING SITE FOR RESIDUE CU A 701
02
AC2
SOFTWARE
ASP A:440 , MET A:441 , ASP A:581 , ILE A:582 , HOH A:760
BINDING SITE FOR RESIDUE NA A 702
03
AC3
SOFTWARE
ASN A:368 , ASP A:393 , GLU A:397 , LYS A:610 , GOL A:654 , HOH A:802
BINDING SITE FOR RESIDUE GOL A 649
04
AC4
SOFTWARE
GLU A:347 , ASP A:348 , TRP A:349 , GLY A:350 , ARG A:370 , LYS A:401 , GOL A:654 , SO4 A:660 , HOH A:736 , HOH A:958 , HOH A:988
BINDING SITE FOR RESIDUE GOL A 650
05
AC5
SOFTWARE
ARG A:479 , ARG A:545 , ASP A:576
BINDING SITE FOR RESIDUE GOL A 651
06
AC6
SOFTWARE
LEU A:590 , ASP A:605 , LYS A:610 , GOL A:653 , HOH A:692 , HOH A:875
BINDING SITE FOR RESIDUE GOL A 652
07
AC7
SOFTWARE
GLY A:492 , LYS A:513 , HIS A:515 , GOL A:652 , HOH A:776 , HOH A:900 , HOH A:925
BINDING SITE FOR RESIDUE GOL A 653
08
AC8
SOFTWARE
ARG A:370 , TYR A:389 , GLU A:397 , GLU A:399 , GOL A:649 , GOL A:650 , HOH A:922
BINDING SITE FOR RESIDUE GOL A 654
09
AC9
SOFTWARE
LEU A:209 , THR A:210 , ARG A:619 , SER A:620 , PRO A:621 , VAL A:622 , LEU A:623 , HOH A:748
BINDING SITE FOR RESIDUE GOL A 655
10
BC1
SOFTWARE
ARG A:532 , ARG A:533 , THR A:554 , HIS A:561 , SER A:562 , GLY A:563 , GLY A:564 , ALA A:565 , HOH A:673
BINDING SITE FOR RESIDUE GOL A 656
11
BC2
SOFTWARE
TYR A:41 , VAL A:44 , LEU A:45 , ASP A:46 , ASP A:250 , ARG A:551 , HOH A:893
BINDING SITE FOR RESIDUE GOL A 657
12
BC3
SOFTWARE
VAL A:159 , ASP A:161 , HIS A:170 , VAL A:197 , ALA A:199
BINDING SITE FOR RESIDUE GOL A 658
13
BC4
SOFTWARE
ASP A:444 , PHE A:446 , THR A:447 , ASN A:499
BINDING SITE FOR RESIDUE GOL A 659
14
BC5
SOFTWARE
ASP A:316 , CYS A:317 , LEU A:318 , HIS A:345 , ARG A:367 , GOL A:650 , HOH A:775 , HOH A:921 , HOH A:927
BINDING SITE FOR RESIDUE SO4 A 660
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: COPPER_AMINE_OXID_1 (A:371-384)
2: COPPER_AMINE_OXID_2 (A:587-600)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
COPPER_AMINE_OXID_1
PS01164
Copper amine oxidase topaquinone signature.
PAOX_ARTGO
371-384
2
A:371-384
2
COPPER_AMINE_OXID_2
PS01165
Copper amine oxidase copper-binding site signature.
PAOX_ARTGO
587-600
2
A:587-600
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Exons
(0, 0)
Info
All Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Cu_amine_oxidN3_3kn4A01 (A:98-198)
2a: PFAM_Cu_amine_oxid_3kn4A02 (A:219-628)
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Clans
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Families
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Organisms
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(
)
Clan
:
CuAO_N2_N3
(40)
Family
:
Cu_amine_oxidN3
(37)
Arthrobacter globiformis
(13)
1a
Cu_amine_oxidN3-3kn4A01
A:98-198
Clan
:
no clan defined [family: Cu_amine_oxid]
(40)
Family
:
Cu_amine_oxid
(40)
Arthrobacter globiformis
(13)
2a
Cu_amine_oxid-3kn4A02
A:219-628
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Chain A
Asymmetric Unit 1
Asymmetric Unit 2
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