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3KLT
Biol. Unit 3
Info
Asym.Unit (55 KB)
Biol.Unit 1 (51 KB)
Biol.Unit 2 (26 KB)
Biol.Unit 3 (26 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A VIMENTIN FRAGMENT
Authors
:
S. Nicolet, S. V. Strelkov
Date
:
09 Nov 09 (Deposition) - 26 May 10 (Release) - 26 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: A,B (1x)
Biol. Unit 3: C,D (1x)
Keywords
:
2A, L2, Alpha-Helix, Coiled-Coil, Parallel Helices, Coiled Coil, Intermediate Filament, Vimentin, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Nicolet, H. Herrmann, U. Aebi, S. V. Strelkov
Atomic Structure Of Vimentin Coil 2.
J. Struct. Biol. V. 170 369 2010
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close entry info
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
3a: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20... (P33a)
4a: HEXAETHYLENE GLYCOL (P6Ga)
5a: TETRAETHYLENE GLYCOL (PG4a)
5b: TETRAETHYLENE GLYCOL (PG4b)
6a: TRIETHYLENE GLYCOL (PGEa)
7a: SAMARIUM (III) ION (SMa)
7b: SAMARIUM (III) ION (SMb)
7c: SAMARIUM (III) ION (SMc)
View:
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No.
Name
Count
Type
Full Name
1
1PE
1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
CA
-1
Ligand/Ion
CALCIUM ION
3
P33
-1
Ligand/Ion
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL
4
P6G
-1
Ligand/Ion
HEXAETHYLENE GLYCOL
5
PG4
2
Ligand/Ion
TETRAETHYLENE GLYCOL
6
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
7
SM
-1
Ligand/Ion
SAMARIUM (III) ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:280 , ASN A:283 , GLU A:286 , ALA A:287 , PG4 C:2 , ASN C:283 , GLU C:286 , TRP C:290 , TYR C:291
BINDING SITE FOR RESIDUE P33 A 1
2
AC2
SOFTWARE
VAL B:279 , ALA B:280 , ASN B:283 , PG4 C:2 , 1PE D:3 , ASN D:283 , ALA D:287 , TYR D:291
BINDING SITE FOR RESIDUE P6G B 4
3
AC3
SOFTWARE
1PE D:3
BINDING SITE FOR RESIDUE SM B 1
4
AC4
SOFTWARE
P33 A:1 , GLU A:286 , ALA A:287 , TYR A:291 , P6G B:4 , TYR C:276 , VAL C:279 , ALA C:280 , ASN C:283 , LEU C:284
BINDING SITE FOR RESIDUE PG4 C 2
5
AC5
SOFTWARE
PHE B:295 , ARG C:273 , GLU C:277
BINDING SITE FOR RESIDUE PG4 C 5
6
AC6
SOFTWARE
SM B:1 , P6G B:4 , GLU B:286 , TRP B:290 , TYR B:291 , TYR D:276 , VAL D:279 , ALA D:280 , ASN D:283
BINDING SITE FOR RESIDUE 1PE D 3
7
AC7
SOFTWARE
GLU C:289 , GLU D:286
BINDING SITE FOR RESIDUE PGE D 6
8
AC8
SOFTWARE
LYS D:294
BINDING SITE FOR RESIDUE CA D 8
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (55 KB)
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