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3KHF
Asym. Unit
Info
Asym.Unit (78 KB)
Biol.Unit 1 (37 KB)
Biol.Unit 2 (38 KB)
Biol.Unit 3 (73 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF THE PDZ DOMAIN OF HUMAN MICROTUBULE ASSOCIATED SERINE/THREONINE KINASE 3 (MAST3)
Authors
:
A. Roos, J. Elkins, P. Savitsky, J. Wang, E. Ugochukwu, J. Murray, C. Bountra, C. H. Arrowsmith, J. Weigelt, A. Edwards, F. Von Delft, S. Knapp, Structural Genomics Consortium (Sgc)
Date
:
30 Oct 09 (Deposition) - 08 Dec 09 (Release) - 08 Dec 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Mast3, Microtubule Associated Serine/Threonine Kinase 3, Kinase, Pdz Domain, Structural Genomics, Structural Genomics , Structural Genomics Consortium, Sgc, Atp- Binding, Magnesium, Nucleotide-Binding, Phosphoprotein, Polymorphism, Serine/Threonine-Protein Kinase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Roos, J. Elkins, P. Savitsky, J. Wang, E. Ugochukwu, F. Von Delft, S. Knapp
The Crystal Structure Of The Pdz Domain Of Human Microtubule Associated Serine/Threonine Kinase 3 (Mast3)
To Be Published
(for further references see the
PDB file header
)
[
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:81 , VAL A:1015 , HOH B:195 , LYS B:1029
BINDING SITE FOR RESIDUE EDO B 1
2
AC2
SOFTWARE
HOH A:41 , HOH A:106 , GLU A:1021 , SER B:955 , LYS B:958 , ASN B:1028
BINDING SITE FOR RESIDUE EDO B 2
3
AC3
SOFTWARE
HOH B:97 , ASN B:1007 , GLY B:1008 , SER B:1031
BINDING SITE FOR RESIDUE CL B 1045
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PDZ (A:950-1038,B:950-1038)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
MAST3_HUMAN
950-1038
2
A:950-1038
B:950-1038
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Exons
(4, 8)
Info
All Exons
Exon 1.23 (A:948-984 (gaps) | B:948-984)
Exon 1.24 (A:985-1025 | B:985-1025)
Exon 1.25 (A:1026-1040 | B:1026-1040)
Exon 1.26 (A:1041-1044 | B:1041-1044)
View:
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All Exon Boundaries
1: Boundary 1.22/1.23
2: Boundary 1.23/1.24
3: Boundary 1.24/1.25
4: Boundary 1.25/1.26
5: Boundary 1.26/1.27
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000262811
1
ENSE00001184250
chr19:
18208603-18208641
39
MAST3_HUMAN
1-13
13
0
-
-
1.2
ENST00000262811
2
ENSE00001184245
chr19:
18218397-18218428
32
MAST3_HUMAN
14-24
11
0
-
-
1.3
ENST00000262811
3
ENSE00001125565
chr19:
18232495-18232583
89
MAST3_HUMAN
24-54
31
0
-
-
1.4
ENST00000262811
4
ENSE00001056306
chr19:
18232660-18232732
73
MAST3_HUMAN
54-78
25
0
-
-
1.5
ENST00000262811
5
ENSE00001056308
chr19:
18233483-18233561
79
MAST3_HUMAN
78-104
27
0
-
-
1.6
ENST00000262811
6
ENSE00001056310
chr19:
18234027-18234184
158
MAST3_HUMAN
105-157
53
0
-
-
1.7
ENST00000262811
7
ENSE00001056302
chr19:
18234390-18234465
76
MAST3_HUMAN
157-182
26
0
-
-
1.8
ENST00000262811
8
ENSE00000871082
chr19:
18234749-18234958
210
MAST3_HUMAN
183-252
70
0
-
-
1.9
ENST00000262811
9
ENSE00000871083
chr19:
18235075-18235176
102
MAST3_HUMAN
253-286
34
0
-
-
1.10
ENST00000262811
10
ENSE00001056311
chr19:
18235452-18235584
133
MAST3_HUMAN
287-331
45
0
-
-
1.11
ENST00000262811
11
ENSE00001056295
chr19:
18239210-18239268
59
MAST3_HUMAN
331-350
20
0
-
-
1.12
ENST00000262811
12
ENSE00000871085
chr19:
18239676-18239761
86
MAST3_HUMAN
351-379
29
0
-
-
1.13
ENST00000262811
13
ENSE00000690133
chr19:
18241304-18241512
209
MAST3_HUMAN
379-449
71
0
-
-
1.14
ENST00000262811
14
ENSE00001661571
chr19:
18242719-18242857
139
MAST3_HUMAN
449-495
47
0
-
-
1.15
ENST00000262811
15
ENSE00000871086
chr19:
18245389-18245521
133
MAST3_HUMAN
495-539
45
0
-
-
1.16
ENST00000262811
16
ENSE00001773958
chr19:
18245627-18245792
166
MAST3_HUMAN
540-595
56
0
-
-
1.17
ENST00000262811
17
ENSE00001113485
chr19:
18246550-18246651
102
MAST3_HUMAN
595-629
35
0
-
-
1.18
ENST00000262811
18
ENSE00001113486
chr19:
18248049-18248171
123
MAST3_HUMAN
629-670
42
0
-
-
1.19
ENST00000262811
19
ENSE00001056303
chr19:
18249825-18249934
110
MAST3_HUMAN
670-706
37
0
-
-
1.20
ENST00000262811
20
ENSE00001056300
chr19:
18252692-18252825
134
MAST3_HUMAN
707-751
45
0
-
-
1.21
ENST00000262811
21
ENSE00001056296
chr19:
18254573-18254817
245
MAST3_HUMAN
751-833
83
0
-
-
1.22
ENST00000262811
22
ENSE00001056304
chr19:
18255276-18255503
228
MAST3_HUMAN
833-909
77
0
-
-
1.23
ENST00000262811
23
ENSE00001056297
chr19:
18255813-18256039
227
MAST3_HUMAN
909-984
76
2
A:948-984 (gaps)
B:948-984
37
37
1.24
ENST00000262811
24
ENSE00001056312
chr19:
18256553-18256675
123
MAST3_HUMAN
985-1025
41
2
A:985-1025
B:985-1025
41
41
1.25
ENST00000262811
25
ENSE00001056299
chr19:
18257691-18257827
137
MAST3_HUMAN
1026-1071
46
2
A:1026-1040
B:1026-1040
15
15
1.26
ENST00000262811
26
ENSE00001056305
chr19:
18258253-18258434
182
MAST3_HUMAN
1071-1132
62
2
A:1041-1044
B:1041-1044
4
4
1.27
ENST00000262811
27
ENSE00001184254
chr19:
18260001-18262499
2499
MAST3_HUMAN
1132-1309
178
0
-
-
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3khfa_ (A:)
1b: SCOP_d3khfb_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
automated matches
(94)
Protein domain
:
automated matches
(94)
Human (Homo sapiens) [TaxId: 9606]
(71)
1a
d3khfa_
A:
1b
d3khfb_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_PDZ_3khfB01 (B:951-1034)
1b: PFAM_PDZ_3khfB02 (B:951-1034)
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Clan
:
PDZ-like
(184)
Family
:
PDZ
(172)
Homo sapiens (Human)
(96)
1a
PDZ-3khfB01
B:951-1034
1b
PDZ-3khfB02
B:951-1034
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