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3K8M
Biol. Unit 1
Info
Asym.Unit (228 KB)
Biol.Unit 1 (114 KB)
Biol.Unit 2 (111 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SUSG WITH ACARBOSE
Authors
:
N. M. Koropatkin, T. J. Smith
Date
:
14 Oct 09 (Deposition) - 02 Mar 10 (Release) - 02 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Amylase, Alpha8/Beta8 Barrel, Cbm, Beta-Sandwich, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. M. Koropatkin, T. J. Smith
Susg: A Unique Cell-Membrane-Associated Alpha-Amylase From A Prominent Human Gut Symbiont Targets Complex Starch Molecules.
Structure V. 18 200 2010
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Hetero Components
(5, 16)
Info
All Hetero Components
1a: ACARBOSE DERIVED TRISACCHARIDE (3SAa)
1b: ACARBOSE DERIVED TRISACCHARIDE (3SAb)
2a: ALPHA-ACARBOSE (ACRa)
2b: ALPHA-ACARBOSE (ACRb)
2c: ALPHA-ACARBOSE (ACRc)
2d: ALPHA-ACARBOSE (ACRd)
3a: CALCIUM ION (CAa)
3b: CALCIUM ION (CAb)
3c: CALCIUM ION (CAc)
3d: CALCIUM ION (CAd)
4a: 1,2-ETHANEDIOL (EDOa)
5a: MALTOSE (MALa)
5b: MALTOSE (MALb)
6a: SELENOMETHIONINE (MSEa)
6b: SELENOMETHIONINE (MSEb)
6c: SELENOMETHIONINE (MSEc)
6d: SELENOMETHIONINE (MSEd)
6e: SELENOMETHIONINE (MSEe)
6f: SELENOMETHIONINE (MSEf)
6g: SELENOMETHIONINE (MSEg)
6h: SELENOMETHIONINE (MSEh)
6i: SELENOMETHIONINE (MSEi)
6j: SELENOMETHIONINE (MSEj)
6k: SELENOMETHIONINE (MSEk)
6l: SELENOMETHIONINE (MSEl)
6m: SELENOMETHIONINE (MSEm)
6n: SELENOMETHIONINE (MSEn)
6o: SELENOMETHIONINE (MSEo)
6p: SELENOMETHIONINE (MSEp)
6q: SELENOMETHIONINE (MSEq)
6r: SELENOMETHIONINE (MSEr)
6s: SELENOMETHIONINE (MSEs)
6t: SELENOMETHIONINE (MSEt)
6u: SELENOMETHIONINE (MSEu)
6v: SELENOMETHIONINE (MSEv)
View:
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Label:
No.
Name
Count
Type
Full Name
1
3SA
1
Ligand/Ion
ACARBOSE DERIVED TRISACCHARIDE
2
ACR
2
Ligand/Ion
ALPHA-ACARBOSE
3
CA
-1
Ligand/Ion
CALCIUM ION
4
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
5
MAL
1
Ligand/Ion
MALTOSE
6
MSE
11
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: BC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:112 , TYR A:114 , HIS A:154 , PHE A:345 , ARG A:386 , ASP A:388 , GLU A:431 , HIS A:497 , ASP A:498 , ASP A:545 , ARG A:549 , MAL A:740
BINDING SITE FOR RESIDUE 3SA A 693
2
AC2
SOFTWARE
ASP A:73 , ASP A:75 , ASP A:77 , TYR A:79 , ASP A:81
BINDING SITE FOR RESIDUE CA A 700
3
AC3
SOFTWARE
ASN A:153 , ASP A:352 , HIS A:392 , ILE A:393 , HOH A:805 , HOH A:806 , HOH A:807
BINDING SITE FOR RESIDUE CA A 710
4
AC4
SOFTWARE
TYR A:260 , GLU A:263 , TRP A:287 , LEU A:290 , TRP A:299 , LYS A:304 , ASN A:330 , GLN B:210 , SER B:212 , ASP B:213
BINDING SITE FOR RESIDUE ACR A 720
5
AC5
SOFTWARE
ARG A:457 , TRP A:460 , TYR A:469 , LYS A:472 , ASP A:473
BINDING SITE FOR RESIDUE ACR A 730
6
AC6
SOFTWARE
ALA A:389 , LYS A:391 , HIS A:392 , GLU A:431 , LEU A:433 , ASP A:498 , 3SA A:693
BINDING SITE FOR RESIDUE MAL A 740
7
AC7
SOFTWARE
TYR A:203 , ALA A:205 , TRP A:208 , TYR A:340
BINDING SITE FOR RESIDUE EDO A 750
8
BC2
SOFTWARE
GLN A:210 , SER A:212 , ASP A:213 , TYR B:260 , TRP B:287 , LEU B:290 , TRP B:299 , LYS B:304 , ASN B:330 , HOH B:729
BINDING SITE FOR RESIDUE ACR B 820
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (228 KB)
Header - Asym.Unit
Biol.Unit 1 (114 KB)
Header - Biol.Unit 1
Biol.Unit 2 (111 KB)
Header - Biol.Unit 2
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