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3K2V
Asym. Unit
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Asym.Unit (60 KB)
Biol.Unit 1 (52 KB)
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(1)
Title
:
STRUCTURE OF THE CBS PAIR OF A PUTATIVE D-ARABINOSE 5-PHOSPHATE ISOMERASE FROM KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE.
Authors
:
M. E. Cuff, L. Volkart, J. Bearden, A. Joachimiak, Midwest Center For Structural Genomics (Mcsg)
Date
:
30 Sep 09 (Deposition) - 22 Dec 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Kpsf-Like Protein, Cbs Domain, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Isomerase
(Keyword Search:
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Reference
:
M. E. Cuff, L. Volkart, J. Bearden, A. Joachimiak
Structure Of The Cbs Pair Of A Putative D-Arabinose 5-Phosphate Isomerase From Klebsiella Pneumoniae Subsp. Pneumoniae.
To Be Published
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Hetero Components
(4, 20)
Info
All Hetero Components
1a: CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-... (CMKa)
1b: CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-... (CMKb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
4a: SULFATE ION (SO4a)
View:
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No.
Name
Count
Type
Full Name
1
CMK
2
Ligand/Ion
CYTIDINE 5'-MONOPHOSPHATE 3-DEOXY-BETA-D-GULO-OCT-2-ULO-PYRANOSONIC ACID
2
GOL
3
Ligand/Ion
GLYCEROL
3
MSE
14
Mod. Amino Acid
SELENOMETHIONINE
4
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:60 , HOH A:61 , HOH A:63 , HOH A:90 , HOH A:129 , HOH A:161 , ILE A:258 , THR A:260 , GLY A:262 , ASP A:263 , ARG A:265 , ARG A:266 , THR A:284 , ILE A:288 , HIS A:307 , ILE A:308 , CYS A:310 , VAL A:311 , HOH A:360 , HOH A:361 , HOH A:373 , ASN B:242 , LEU B:243 , GLY B:244 , ASP B:261 , HIS B:324 , GOL B:332
BINDING SITE FOR RESIDUE CMK A 1
2
AC2
SOFTWARE
HOH A:131 , ASN A:242 , GLY A:244 , ASP A:261 , HIS A:324 , HIS A:326 , GOL A:333 , HOH B:3 , HOH B:114 , ILE B:258 , THR B:260 , GLY B:262 , ASP B:263 , ARG B:265 , ARG B:266 , THR B:284 , GLY B:287 , ILE B:288 , HIS B:307 , ILE B:308 , CYS B:310 , VAL B:311 , HOH B:346 , HOH B:366 , HOH B:374 , HOH B:375 , HOH B:381
BINDING SITE FOR RESIDUE CMK B 1
3
AC3
SOFTWARE
HOH A:103 , ARG A:291 , GLY A:316 , ASP A:317
BINDING SITE FOR RESIDUE SO4 A 332
4
AC4
SOFTWARE
CMK A:1 , HIS A:307 , HOH B:141 , HOH B:179 , HIS B:217 , ASN B:242
BINDING SITE FOR RESIDUE GOL B 332
5
AC5
SOFTWARE
ASN A:242 , LEU A:243 , ASP A:327 , ARG A:330 , CMK B:1
BINDING SITE FOR RESIDUE GOL A 333
6
AC6
SOFTWARE
ASN A:301 , HOH A:382 , HOH A:386 , HOH A:391
BINDING SITE FOR RESIDUE GOL A 334
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3k2va_ (A:)
1b: SCOP_d3k2vb_ (B:)
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Protein Domains
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
CBS-domain pair
(75)
Superfamily
:
CBS-domain pair
(75)
Family
:
automated matches
(25)
Protein domain
:
automated matches
(25)
Klebsiella pneumoniae [TaxId: 272620]
(1)
1a
d3k2va_
A:
1b
d3k2vb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3k2vA00 (A:202-331)
1b: CATH_3k2vB00 (B:203-330)
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Homologous Superfamilies
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
CBS-domain
(5)
Homologous Superfamily
:
CBS-domain
(5)
Pneumoniae mgh 78578 (Klebsiella pneumoniae subsp)
(1)
1a
3k2vA00
A:202-331
1b
3k2vB00
B:203-330
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_CBS_3k2vB01 (B:279-330)
1b: PFAM_CBS_3k2vB02 (B:279-330)
1c: PFAM_CBS_3k2vB03 (B:279-330)
1d: PFAM_CBS_3k2vB04 (B:279-330)
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Clan
:
no clan defined [family: CBS]
(51)
Family
:
CBS
(51)
Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
(1)
1a
CBS-3k2vB01
B:279-330
1b
CBS-3k2vB02
B:279-330
1c
CBS-3k2vB03
B:279-330
1d
CBS-3k2vB04
B:279-330
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Asymmetric Unit 1
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