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3K1W
Biol. Unit 3
Info
Asym.Unit (127 KB)
Biol.Unit 1 (63 KB)
Biol.Unit 2 (63 KB)
Biol.Unit 3 (122 KB)
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(1)
Title
:
NEW CLASSES OF POTENT AND BIOAVAILABLE HUMAN RENIN INHIBITORS
Authors
:
L. Prade
Date
:
29 Sep 09 (Deposition) - 02 Mar 10 (Release) - 02 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Renin, Protease, Alternative Splicing, Aspartyl Protease, Cleavage On Pair Of Basic Residues, Disease Mutation, Disulfide Bond, Glycoprotein, Hydrolase, Membrane, Polymorphism, Secreted, Zymogen
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Remen, O. Bezencon, S. Richard-Bildstein, D. Bur, L. Prade, O. Corminboeuf, C. Boss, C. Grisostomi, T. Sifferlen, P. Strickner, P. Hess, S. Delahaye, A. Treiber, T. Weller, C. Binkert, B. Steiner, W. Fischli
New Classes Of Potent And Bioavailable Human Renin Inhibitors
Bioorg. Med. Chem. Lett. V. 19 6762 2009
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Hetero Components
(4, 6)
Info
All Hetero Components
1a: 4-{4-[3-(2-BROMO-5-FLUOROPHENOXY)P... (BFXa)
1b: 4-{4-[3-(2-BROMO-5-FLUOROPHENOXY)P... (BFXb)
2a: CHLORIDE ION (CLa)
3a: FORMIC ACID (FMTa)
3b: FORMIC ACID (FMTb)
4a: 2-(ACETYLAMINO)-2-DEOXY-ALPHA-L-ID... (HSQa)
5a: 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOP... (NDGa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BFX
2
Ligand/Ion
4-{4-[3-(2-BROMO-5-FLUOROPHENOXY)PROPYL]PHENYL}-N-(2-CHLOROBENZYL)-N-CYCLOPROPYL-1,2,5,6-TETRAHYDROPYRIDINE-3-CARBOXAMIDE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
FMT
2
Ligand/Ion
FORMIC ACID
4
HSQ
1
Ligand/Ion
2-(ACETYLAMINO)-2-DEOXY-ALPHA-L-IDOPYRANOSE
5
NDG
1
Ligand/Ion
2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:38 , GLY A:40 , TRP A:45 , VAL A:46 , PRO A:47 , LEU A:81 , PHE A:119 , ALA A:122 , PHE A:124 , ASP A:125 , ASP A:226 , GLY A:228 , SER A:230 , FMT A:343
BINDING SITE FOR RESIDUE BFX A 342
2
AC2
SOFTWARE
THR A:18 , GLN A:19 , TYR A:20 , VAL A:36 , GLY A:228 , BFX A:342 , HOH A:348
BINDING SITE FOR RESIDUE FMT A 343
3
AC3
SOFTWARE
ASN A:75 , THR A:77 , MET A:107 , HOH A:431 , HOH A:534 , HOH A:588
BINDING SITE FOR RESIDUE NDG A 344
4
AC4
SOFTWARE
ASP B:38 , GLY B:40 , TRP B:45 , LEU B:81 , TYR B:83 , VAL B:111 , PHE B:119 , ALA B:122 , PHE B:124 , ASP B:125 , ASP B:226 , GLY B:228 , SER B:230 , FMT B:344
BINDING SITE FOR RESIDUE BFX B 342
5
AC5
SOFTWARE
THR B:18 , GLN B:19 , HOH B:491
BINDING SITE FOR RESIDUE CL B 343
6
AC6
SOFTWARE
THR B:18 , GLN B:19 , TYR B:20 , GLY B:228 , BFX B:342 , HOH B:373
BINDING SITE FOR RESIDUE FMT B 344
7
AC7
SOFTWARE
ASN B:75 , THR B:77
BINDING SITE FOR RESIDUE HSQ B 345
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SAPs(SNPs)/Variants
(4, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_035088 (D38N, chain A/B, )
2: VAR_029171 (Q94K, chain A/B, )
3: VAR_020376 (G151R, chain A/B, )
4: VAR_035087 (R164K, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_035088
D
104
N
RENI_HUMAN
Disease (RTD)
---
A/B
D
38
N
2
UniProt
VAR_029171
Q
160
K
RENI_HUMAN
Polymorphism
11571083
A/B
Q
94
K
3
UniProt
VAR_020376
G
217
R
RENI_HUMAN
Polymorphism
11571117
A/B
G
151
R
4
UniProt
VAR_035087
R
230
K
RENI_HUMAN
Disease (RTD)
---
A/B
R
164
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: PEPTIDASE_A1 (A:20-337,B:20-337)
2: ASP_PROTEASE (A:35-46,A:223-234,B:223-234)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEPTIDASE_A1
PS51767
Peptidase family A1 domain profile.
RENI_HUMAN
86-403
2
A:20-337
B:20-337
2
ASP_PROTEASE
PS00141
Eukaryotic and viral aspartyl proteases active site.
RENI_HUMAN
101-112
289-300
4
A:35-46
B:35-46
A:223-234
B:223-234
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3k1wa_ (A:)
1b: SCOP_d3k1wb_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
Acid proteases
(1120)
Superfamily
:
Acid proteases
(1120)
Family
:
Pepsin-like
(505)
Protein domain
:
Chymosin (synonym: renin)
(67)
Human (Homo sapiens) [TaxId: 9606]
(60)
1a
d3k1wa_
A:
1b
d3k1wb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (127 KB)
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