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Asym. Unit
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Asym.Unit (483 KB)
Biol.Unit 1 (473 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE PHOSPHORYLATION-SITE MUTANT T432A OF THE KAIC CIRCADIAN CLOCK PROTEIN
Authors
:
R. Pattanayek, M. Egli, S. Pattanayek
Date
:
23 Sep 09 (Deposition) - 31 Mar 10 (Release) - 31 Mar 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Kaic, Circadian Clock Protein, Kinase, Hexamer, Atp-Binding, Biological Rhythms, Dna-Binding, Magnesium, Metal-Binding, Nucleotide-Binding, Phosphoprotein, Repressor, Serine/Threonine-Protein Kinase, Transcription, Transcription Regulation, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Pattanayek, T. Mori, Y. Xu, S. Pattanayek, C. H. Johnson, M. Egli
Structures Of Kaic Circadian Clock Mutant Proteins: A New Phosphorylation Site At T426 And Mechanisms Of Kinase, Atpase And Phosphatase.
Plos One V. 4 E7529 2009
[
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Hetero Components
(3, 36)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
1c: ADENOSINE-5'-TRIPHOSPHATE (ATPc)
1d: ADENOSINE-5'-TRIPHOSPHATE (ATPd)
1e: ADENOSINE-5'-TRIPHOSPHATE (ATPe)
1f: ADENOSINE-5'-TRIPHOSPHATE (ATPf)
1g: ADENOSINE-5'-TRIPHOSPHATE (ATPg)
1h: ADENOSINE-5'-TRIPHOSPHATE (ATPh)
1i: ADENOSINE-5'-TRIPHOSPHATE (ATPi)
1j: ADENOSINE-5'-TRIPHOSPHATE (ATPj)
1k: ADENOSINE-5'-TRIPHOSPHATE (ATPk)
1l: ADENOSINE-5'-TRIPHOSPHATE (ATPl)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
2h: MAGNESIUM ION (MGh)
2i: MAGNESIUM ION (MGi)
2j: MAGNESIUM ION (MGj)
2k: MAGNESIUM ION (MGk)
2l: MAGNESIUM ION (MGl)
2m: MAGNESIUM ION (MGm)
2n: MAGNESIUM ION (MGn)
2o: MAGNESIUM ION (MGo)
2p: MAGNESIUM ION (MGp)
2q: MAGNESIUM ION (MGq)
2r: MAGNESIUM ION (MGr)
3a: PHOSPHOSERINE (SEPa)
3b: PHOSPHOSERINE (SEPb)
3c: PHOSPHOSERINE (SEPc)
3d: PHOSPHOSERINE (SEPd)
3e: PHOSPHOSERINE (SEPe)
3f: PHOSPHOSERINE (SEPf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
12
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
MG
18
Ligand/Ion
MAGNESIUM ION
3
SEP
6
Mod. Amino Acid
PHOSPHOSERINE
[
close Hetero Component info
]
Sites
(30, 30)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:290 , GLY A:291 , THR A:292 , GLY A:293 , LYS A:294 , THR A:295 , LEU A:296 , TRP A:331 , ARG A:451 , ILE A:472 , MG A:801 , MG A:802 , LYS B:457 , MET B:458 , ARG B:459 , GLY B:460 , SER B:461 , TRP B:462 , HIS B:463 , LYS B:465
BINDING SITE FOR RESIDUE ATP A 901
02
AC2
SOFTWARE
GLY A:49 , THR A:50 , GLY A:51 , LYS A:52 , THR A:53 , LEU A:54 , SER A:89 , PHE A:90 , ARG A:218 , ILE A:239 , THR A:240 , ASP A:241 , MG A:701 , LYS B:224 , LEU B:225 , ARG B:226 , THR B:228 , SER B:229 , HIS B:230 , MG B:527
BINDING SITE FOR RESIDUE ATP A 903
03
AC3
SOFTWARE
THR A:295 , GLU A:318 , ASP A:378 , MG A:802 , ATP A:901
BINDING SITE FOR RESIDUE MG A 801
04
AC4
SOFTWARE
THR A:290 , LYS A:294 , THR A:415 , MG A:801 , ATP A:901
BINDING SITE FOR RESIDUE MG A 802
05
AC5
SOFTWARE
THR A:53 , GLU A:78 , ATP A:903 , ARG B:226
BINDING SITE FOR RESIDUE MG A 701
06
AC6
SOFTWARE
ATP A:903 , PHE B:199 , LYS B:224
BINDING SITE FOR RESIDUE MG B 527
07
AC7
SOFTWARE
THR B:290 , GLY B:291 , THR B:292 , GLY B:293 , LYS B:294 , THR B:295 , LEU B:296 , SER B:330 , TRP B:331 , ARG B:451 , ILE B:472 , MG B:801 , LYS C:457 , MET C:458 , ARG C:459 , SER C:461 , TRP C:462 , HIS C:463 , LYS C:465
BINDING SITE FOR RESIDUE ATP B 901
08
AC8
SOFTWARE
GLY B:49 , THR B:50 , GLY B:51 , LYS B:52 , THR B:53 , LEU B:54 , SER B:89 , PHE B:90 , ASP B:145 , ARG B:218 , ILE B:239 , ASP B:241 , MG B:701 , LYS C:224 , LEU C:225 , ARG C:226 , THR C:228 , SER C:229 , HIS C:230
BINDING SITE FOR RESIDUE ATP B 903
09
AC9
SOFTWARE
THR B:295 , GLU B:318 , GLU B:319 , ATP B:901
BINDING SITE FOR RESIDUE MG B 801
10
BC1
SOFTWARE
LYS B:52 , ATP B:903 , PHE C:199 , LYS C:224
BINDING SITE FOR RESIDUE MG B 701
11
BC2
SOFTWARE
THR C:290 , GLY C:291 , THR C:292 , GLY C:293 , LYS C:294 , THR C:295 , LEU C:296 , SER C:330 , TRP C:331 , ARG C:451 , ILE C:472 , MG C:801 , LYS D:457 , MET D:458 , ARG D:459 , SER D:461 , TRP D:462 , HIS D:463 , HOH D:525
BINDING SITE FOR RESIDUE ATP C 901
12
BC3
SOFTWARE
GLY C:49 , THR C:50 , GLY C:51 , LYS C:52 , THR C:53 , LEU C:54 , SER C:89 , PHE C:90 , ARG C:218 , ILE C:239 , ASP C:241 , MG C:520 , LYS D:224 , ARG D:226 , THR D:228 , SER D:229 , HIS D:230
BINDING SITE FOR RESIDUE ATP C 903
13
BC4
SOFTWARE
THR C:295 , GLU C:318 , ATP C:901
BINDING SITE FOR RESIDUE MG C 801
14
BC5
SOFTWARE
THR C:53 , GLU C:78 , ATP C:903 , ARG D:226
BINDING SITE FOR RESIDUE MG C 520
15
BC6
SOFTWARE
THR D:290 , GLY D:291 , THR D:292 , GLY D:293 , LYS D:294 , THR D:295 , LEU D:296 , SER D:330 , TRP D:331 , ARG D:451 , ILE D:472 , MG D:802 , LYS E:457 , MET E:458 , ARG E:459 , SER E:461 , TRP E:462 , HIS E:463 , LYS E:465
BINDING SITE FOR RESIDUE ATP D 901
16
BC7
SOFTWARE
GLY D:49 , THR D:50 , GLY D:51 , LYS D:52 , THR D:53 , LEU D:54 , GLU D:78 , SER D:89 , PHE D:90 , ARG D:218 , ILE D:239 , THR D:240 , ASP D:241 , MG D:701 , MG D:702 , LYS E:224 , LEU E:225 , ARG E:226 , THR E:228 , SER E:229 , HIS E:230
BINDING SITE FOR RESIDUE ATP D 903
17
BC8
SOFTWARE
THR D:295 , GLU D:319 , ATP D:901
BINDING SITE FOR RESIDUE MG D 802
18
BC9
SOFTWARE
LYS D:52 , ATP D:903
BINDING SITE FOR RESIDUE MG D 701
19
CC1
SOFTWARE
THR D:53 , GLU D:78 , ASP D:145 , ATP D:903
BINDING SITE FOR RESIDUE MG D 702
20
CC2
SOFTWARE
THR E:290 , GLY E:291 , THR E:292 , GLY E:293 , LYS E:294 , THR E:295 , LEU E:296 , SER E:330 , TRP E:331 , ARG E:451 , ILE E:472 , MG E:801 , LYS F:457 , MET F:458 , ARG F:459 , SER F:461 , TRP F:462 , HIS F:463 , LYS F:465
BINDING SITE FOR RESIDUE ATP E 901
21
CC3
SOFTWARE
GLY E:49 , THR E:50 , GLY E:51 , LYS E:52 , THR E:53 , LEU E:54 , GLU E:78 , SER E:89 , PHE E:90 , ILE E:239 , ASP E:241 , MG E:701 , MG E:702 , LEU F:223 , LYS F:224 , LEU F:225 , ARG F:226 , THR F:228 , SER F:229 , HIS F:230 , LYS F:232
BINDING SITE FOR RESIDUE ATP E 903
22
CC4
SOFTWARE
THR E:295 , GLU E:318 , GLU E:319 , ATP E:901
BINDING SITE FOR RESIDUE MG E 801
23
CC5
SOFTWARE
GLY E:49 , LYS E:52 , ATP E:903 , LYS F:224
BINDING SITE FOR RESIDUE MG E 701
24
CC6
SOFTWARE
LYS E:52 , THR E:53 , ASP E:145 , THR E:181 , ATP E:903
BINDING SITE FOR RESIDUE MG E 702
25
CC7
SOFTWARE
LYS A:457 , MET A:458 , ARG A:459 , SER A:461 , TRP A:462 , HIS A:463 , LYS A:465 , THR F:290 , GLY F:291 , THR F:292 , GLY F:293 , LYS F:294 , THR F:295 , LEU F:296 , TRP F:331 , ARG F:451 , ILE F:472 , MG F:801 , MG F:802
BINDING SITE FOR RESIDUE ATP F 901
26
CC8
SOFTWARE
LYS A:224 , ARG A:226 , THR A:228 , HIS A:230 , LYS A:232 , GLY F:49 , THR F:50 , GLY F:51 , LYS F:52 , THR F:53 , LEU F:54 , GLU F:78 , SER F:89 , PHE F:90 , ILE F:239 , ASP F:241 , HOH F:531 , MG F:701 , MG F:702
BINDING SITE FOR RESIDUE ATP F 903
27
CC9
SOFTWARE
THR F:53 , ASP F:145 , ATP F:903
BINDING SITE FOR RESIDUE MG F 701
28
DC1
SOFTWARE
LYS A:224 , SER F:48 , GLY F:49 , ATP F:903
BINDING SITE FOR RESIDUE MG F 702
29
DC2
SOFTWARE
THR F:295 , GLU F:318 , ATP F:901
BINDING SITE FOR RESIDUE MG F 802
30
DC3
SOFTWARE
ALA A:432 , THR F:290 , LYS F:294 , GLU F:318 , THR F:415 , ATP F:901
BINDING SITE FOR RESIDUE MG F 801
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(1, 12)
Info
All PROSITE Patterns/Profiles
1: KAIC (A:19-260,B:19-260,C:19-260,D:19-26...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KAIC
PS51146
KaiC domain profile.
KAIC_SYNE7
19-260
261-493
12
A:19-260
B:19-260
C:19-260
D:19-260
E:19-260
F:19-260
A:261-493
B:261-493
C:261-493
D:261-493
E:261-493
F:261-493
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Label:
Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_KaiC_3jzmF01 (F:263-482)
1b: PFAM_KaiC_3jzmF02 (F:263-482)
1c: PFAM_KaiC_3jzmF03 (F:263-482)
1d: PFAM_KaiC_3jzmF04 (F:263-482)
1e: PFAM_KaiC_3jzmF05 (F:263-482)
1f: PFAM_KaiC_3jzmF06 (F:263-482)
1g: PFAM_KaiC_3jzmF07 (F:263-482)
1h: PFAM_KaiC_3jzmF08 (F:263-482)
1i: PFAM_KaiC_3jzmF09 (F:263-482)
1j: PFAM_KaiC_3jzmF10 (F:263-482)
1k: PFAM_KaiC_3jzmF11 (F:263-482)
1l: PFAM_KaiC_3jzmF12 (F:263-482)
View:
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Clans
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(
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Families
(
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(
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Organisms
(
)
(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
KaiC
(9)
Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
(7)
1a
KaiC-3jzmF01
F:263-482
1b
KaiC-3jzmF02
F:263-482
1c
KaiC-3jzmF03
F:263-482
1d
KaiC-3jzmF04
F:263-482
1e
KaiC-3jzmF05
F:263-482
1f
KaiC-3jzmF06
F:263-482
1g
KaiC-3jzmF07
F:263-482
1h
KaiC-3jzmF08
F:263-482
1i
KaiC-3jzmF09
F:263-482
1j
KaiC-3jzmF10
F:263-482
1k
KaiC-3jzmF11
F:263-482
1l
KaiC-3jzmF12
F:263-482
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