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Asym. Unit
Info
Asym.Unit (86 KB)
Biol.Unit 1 (82 KB)
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(1)
Title
:
PHOSPHORYLATED BC DOMAIN OF ACC2
Authors
:
Y. S. Cho, J. I. Lee, D. Shin, H. T. Kim, T. G. Lee, Y. S. Heo
Date
:
09 Sep 09 (Deposition) - 12 Jan 10 (Release) - 12 Jan 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Bc Domain, Phosphorylation, Alternative Splicing, Atp- Binding, Biotin, Fatty Acid Biosynthesis, Ligase, Lipid Synthesis, Manganese, Membrane, Metal-Binding, Multifunctional Enzyme, Nucleotide-Binding, Phosphoprotein, Polymorphism
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. S. Cho, J. I. Lee, D. Shin, H. T. Kim, H. Y. Jung, T. G. Lee, L. W. Kang, Y. J. Ahn, H. S. Cho, Y. S. Heo
Molecular Mechanism For The Regulation Of Human Acc2 Through Phosphorylation By Ampk
Biochem. Biophys. Res. Commun. V. 391 187 2010
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(1, 1)
Info
All Hetero Components
1a: PHOSPHOSERINE (SEPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
[
close Hetero Component info
]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_031255 (I552V, chain A, )
2: VAR_031256 (A651T, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_031255
I
552
V
ACACB_HUMAN
Polymorphism
16940029
A
I
552
V
2
UniProt
VAR_031256
A
651
T
ACACB_HUMAN
Polymorphism
2300455
A
A
651
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: BC (A:259-759)
2: CPSASE_1 (A:449-463)
3: CPSASE_2 (A:578-585)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BC
PS50979
Biotin carboxylation domain profile.
ACACB_HUMAN
259-761
1
A:259-759
2
CPSASE_1
PS00866
Carbamoyl-phosphate synthase subdomain signature 1.
ACACB_HUMAN
449-463
1
A:449-463
3
CPSASE_2
PS00867
Carbamoyl-phosphate synthase subdomain signature 2.
ACACB_HUMAN
578-585
1
A:578-585
[
close PROSITE info
]
Exons
(12, 12)
Info
All Exons
Exon 1.2 (A:220-262 (gaps))
Exon 1.3 (A:263-309)
Exon 1.4 (A:309-345)
Exon 1.5 (A:346-373)
Exon 1.6 (A:373-406)
Exon 1.7 (A:406-442 (gaps))
Exon 1.8 (A:443-479)
Exon 1.9 (A:480-549)
Exon 1.10 (A:550-606)
Exon 1.11 (A:607-656)
Exon 1.12 (A:666-715 (gaps))
Exon 1.13 (A:715-759)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.1a/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.8
08: Boundary 1.8/1.9
09: Boundary 1.9/1.10
10: Boundary 1.10/1.11
11: Boundary 1.11/1.12
12: Boundary 1.12/1.13
13: Boundary 1.13/1.14
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000377848
1a
ENSE00002193931
chr12:
109577202-109577863
662
ACACB_HUMAN
1-218
218
0
-
-
1.2
ENST00000377848
2
ENSE00001592576
chr12:
109604666-109604798
133
ACACB_HUMAN
218-262
45
1
A:220-262 (gaps)
43
1.3
ENST00000377848
3
ENSE00001645737
chr12:
109605701-109605839
139
ACACB_HUMAN
263-309
47
1
A:263-309
47
1.4
ENST00000377848
4
ENSE00001696806
chr12:
109609610-109609719
110
ACACB_HUMAN
309-345
37
1
A:309-345
37
1.5
ENST00000377848
5
ENSE00001659607
chr12:
109610080-109610161
82
ACACB_HUMAN
346-373
28
1
A:346-373
28
1.6
ENST00000377848
6
ENSE00001752262
chr12:
109611937-109612035
99
ACACB_HUMAN
373-406
34
1
A:373-406
34
1.7
ENST00000377848
7
ENSE00001658849
chr12:
109613736-109613845
110
ACACB_HUMAN
406-442
37
1
A:406-442 (gaps)
37
1.8
ENST00000377848
8
ENSE00001745001
chr12:
109613958-109614068
111
ACACB_HUMAN
443-479
37
1
A:443-479
37
1.9
ENST00000377848
9
ENSE00001659729
chr12:
109616893-109617102
210
ACACB_HUMAN
480-549
70
1
A:480-549
70
1.10
ENST00000377848
10
ENSE00001734325
chr12:
109617722-109617892
171
ACACB_HUMAN
550-606
57
1
A:550-606
57
1.11
ENST00000377848
11
ENSE00001678287
chr12:
109623384-109623545
162
ACACB_HUMAN
607-660
54
1
A:607-656
50
1.12
ENST00000377848
12
ENSE00001749990
chr12:
109625804-109625967
164
ACACB_HUMAN
661-715
55
1
A:666-715 (gaps)
50
1.13
ENST00000377848
13
ENSE00001780825
chr12:
109629418-109629568
151
ACACB_HUMAN
715-765
51
1
A:715-759
45
1.14
ENST00000377848
14
ENSE00001738467
chr12:
109629652-109629755
104
ACACB_HUMAN
766-800
35
0
-
-
1.15
ENST00000377848
15
ENSE00001614723
chr12:
109631453-109631534
82
ACACB_HUMAN
800-827
28
0
-
-
1.16
ENST00000377848
16
ENSE00001662933
chr12:
109634813-109634958
146
ACACB_HUMAN
828-876
49
0
-
-
1.17
ENST00000377848
17
ENSE00001682078
chr12:
109637207-109637357
151
ACACB_HUMAN
876-926
51
0
-
-
1.18
ENST00000377848
18
ENSE00001599746
chr12:
109639372-109639506
135
ACACB_HUMAN
927-971
45
0
-
-
1.19
ENST00000377848
19
ENSE00001711654
chr12:
109644515-109644661
147
ACACB_HUMAN
972-1020
49
0
-
-
1.20
ENST00000377848
20
ENSE00001649091
chr12:
109646970-109647158
189
ACACB_HUMAN
1021-1083
63
0
-
-
1.21
ENST00000377848
21
ENSE00001641104
chr12:
109650641-109650741
101
ACACB_HUMAN
1084-1117
34
0
-
-
1.22b
ENST00000377848
22b
ENSE00001756818
chr12:
109654423-109654511
89
ACACB_HUMAN
1117-1147
31
0
-
-
1.23b
ENST00000377848
23b
ENSE00001595891
chr12:
109654601-109654725
125
ACACB_HUMAN
1147-1188
42
0
-
-
1.25
ENST00000377848
25
ENSE00001629446
chr12:
109660312-109660425
114
ACACB_HUMAN
1189-1226
38
0
-
-
1.26
ENST00000377848
26
ENSE00001802870
chr12:
109660604-109660717
114
ACACB_HUMAN
1227-1264
38
0
-
-
1.27
ENST00000377848
27
ENSE00001718675
chr12:
109661620-109661709
90
ACACB_HUMAN
1265-1294
30
0
-
-
1.28
ENST00000377848
28
ENSE00001732085
chr12:
109665176-109665294
119
ACACB_HUMAN
1295-1334
40
0
-
-
1.29
ENST00000377848
29
ENSE00001671433
chr12:
109670474-109670611
138
ACACB_HUMAN
1334-1380
47
0
-
-
1.30
ENST00000377848
30
ENSE00000754740
chr12:
109671553-109671652
100
ACACB_HUMAN
1380-1413
34
0
-
-
1.31
ENST00000377848
31
ENSE00000754741
chr12:
109671743-109671850
108
ACACB_HUMAN
1414-1449
36
0
-
-
1.32
ENST00000377848
32
ENSE00000754742
chr12:
109673118-109673174
57
ACACB_HUMAN
1450-1468
19
0
-
-
1.33
ENST00000377848
33
ENSE00000754743
chr12:
109673411-109673452
42
ACACB_HUMAN
1469-1482
14
0
-
-
1.34
ENST00000377848
34
ENSE00000410836
chr12:
109674970-109675185
216
ACACB_HUMAN
1483-1554
72
0
-
-
1.35
ENST00000377848
35
ENSE00001601824
chr12:
109677635-109677790
156
ACACB_HUMAN
1555-1606
52
0
-
-
1.36
ENST00000377848
36
ENSE00000754745
chr12:
109678883-109679086
204
ACACB_HUMAN
1607-1674
68
0
-
-
1.37
ENST00000377848
37
ENSE00001507550
chr12:
109680242-109680397
156
ACACB_HUMAN
1675-1726
52
0
-
-
1.38
ENST00000377848
38
ENSE00001197605
chr12:
109683431-109683553
123
ACACB_HUMAN
1727-1767
41
0
-
-
1.39
ENST00000377848
39
ENSE00000834687
chr12:
109683984-109684253
270
ACACB_HUMAN
1768-1857
90
0
-
-
1.40
ENST00000377848
40
ENSE00000834688
chr12:
109685411-109685508
98
ACACB_HUMAN
1858-1890
33
0
-
-
1.41
ENST00000377848
41
ENSE00000754750
chr12:
109687789-109687909
121
ACACB_HUMAN
1890-1930
41
0
-
-
1.42
ENST00000377848
42
ENSE00000754751
chr12:
109689851-109689961
111
ACACB_HUMAN
1931-1967
37
0
-
-
1.43
ENST00000377848
43
ENSE00000754752
chr12:
109690820-109690963
144
ACACB_HUMAN
1968-2015
48
0
-
-
1.44
ENST00000377848
44
ENSE00000754753
chr12:
109692019-109692139
121
ACACB_HUMAN
2016-2056
41
0
-
-
1.45
ENST00000377848
45
ENSE00000754755
chr12:
109693945-109694041
97
ACACB_HUMAN
2056-2088
33
0
-
-
1.46
ENST00000377848
46
ENSE00000754756
chr12:
109696073-109696169
97
ACACB_HUMAN
2088-2120
33
0
-
-
1.47
ENST00000377848
47
ENSE00000754757
chr12:
109696778-109696913
136
ACACB_HUMAN
2121-2166
46
0
-
-
1.49
ENST00000377848
49
ENSE00001654404
chr12:
109698285-109698462
178
ACACB_HUMAN
2166-2225
60
0
-
-
1.50
ENST00000377848
50
ENSE00000754759
chr12:
109700162-109700274
113
ACACB_HUMAN
2225-2263
39
0
-
-
1.51
ENST00000377848
51
ENSE00000754760
chr12:
109702037-109702191
155
ACACB_HUMAN
2263-2314
52
0
-
-
1.52
ENST00000377848
52
ENSE00000754761
chr12:
109702915-109703085
171
ACACB_HUMAN
2315-2371
57
0
-
-
1.53
ENST00000377848
53
ENSE00000754762
chr12:
109703194-109703330
137
ACACB_HUMAN
2372-2417
46
0
-
-
1.54b
ENST00000377848
54b
ENSE00001423352
chr12:
109704041-109706028
1988
ACACB_HUMAN
2417-2458
42
0
-
-
[
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]
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_CPSase_L_D2_3jrwA01 (A:418-616)
2a: PFAM_Biotin_carb_C_3jrwA02 (A:650-757)
3a: PFAM_CPSase_L_chain_3jrwA03 (A:259-379)
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Clan
:
ATP-grasp
(83)
Family
:
CPSase_L_D2
(25)
Homo sapiens (Human)
(3)
1a
CPSase_L_D2-3jrwA01
A:418-616
Clan
:
no clan defined [family: Biotin_carb_C]
(23)
Family
:
Biotin_carb_C
(23)
Homo sapiens (Human)
(3)
2a
Biotin_carb_C-3jrwA02
A:650-757
Clan
:
no clan defined [family: CPSase_L_chain]
(25)
Family
:
CPSase_L_chain
(25)
Homo sapiens (Human)
(3)
3a
CPSase_L_chain-3jrwA03
A:259-379
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