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3J04
Asym. Unit
Info
Asym.Unit (340 KB)
Biol.Unit 1 (333 KB)
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(1)
Title
:
EM STRUCTURE OF THE HEAVY MEROMYOSIN SUBFRAGMENT OF CHICK SMOOTH MUSCLE MYOSIN WITH REGULATORY LIGHT CHAIN IN PHOSPHORYLATED STATE
Authors
:
B. A. J. Baumann, D. Taylor, Z. Huang, F. Tama, P. M. Fagnant, K. Trybus, K
Date
:
18 Feb 11 (Deposition) - 16 Nov 11 (Release) - 01 Feb 12 (Revision)
Method
:
ELECTRON MICROSCOPY
Resolution
:
20.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Phosphorylation, 2D Crystalline Arrays, Myosin Regulation, Myosin Light Chains, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. A. Baumann, D. W. Taylor, Z. Huang, F. Tama, P. M. Fagnant, K. M. Trybus, K. A. Taylor
Phosphorylated Smooth Muscle Heavy Meromyosin Shows An Open Conformation Linked To Activation.
J. Mol. Biol. V. 415 274 2012
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Hetero Components
(0, 0)
Info
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(4, 18)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (C:6-41,F:6-41|C:83-118,F:83-118|C:...)
2: EF_HAND_1 (B:41-53,E:41-53)
3: MYOSIN_MOTOR (A:84-789,D:84-789)
4: IQ (A:792-821,D:792-821)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
MYL6_CHICK
7-42
84-119
134-151
6
C:6-41
F:6-41
C:83-118
F:83-118
C:133-150
F:133-150
MLRM_CHICK
29-64
98-133
134-169
6
B:28-63
E:28-63
B:97-132
E:97-132
B:133-167
E:133-167
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
MLRM_CHICK
42-54
2
B:41-53
E:41-53
3
MYOSIN_MOTOR
PS51456
Myosin motor domain profile.
MYH11_CHICK
84-789
2
A:84-789
D:84-789
4
IQ
PS50096
IQ motif profile.
MYH11_CHICK
792-821
2
A:792-821
D:792-821
[
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Exons
(22, 44)
Info
All Exons
Exon 1.2a (A:2-114 | D:2-114)
Exon 1.3 (A:115-167 | D:115-167)
Exon 1.4 (A:167-176 | D:167-176)
Exon 1.5c (A:176-216 | D:176-216)
Exon 1.6 (A:216-217 | D:216-217)
Exon 1.8b (A:218-248 | D:218-248)
Exon 1.9 (A:249-270 | D:249-270)
Exon 1.10 (A:270-303 | D:270-303)
Exon 1.11 (A:303-351 | D:303-351)
Exon 1.12 (A:351-383 | D:351-383)
Exon 1.13 (A:383-422 | D:383-422)
Exon 1.14 (A:423-473 (gaps) | D:423-473 (gaps...)
Exon 1.15 (A:474-531 | D:474-531)
Exon 1.16 (A:532-589 | D:532-589)
Exon 1.17 (A:590-628 | D:590-628)
Exon 1.18a (A:628-692 | D:628-692)
Exon 1.19 (A:693-733 | D:693-733)
Exon 1.20 (A:733-756 | D:733-756)
Exon 1.21 (A:757-810 | D:757-810)
Exon 1.22 (A:810-846 | D:810-846)
Exon 1.23 (A:847-890 | D:847-890)
Exon 1.24 (A:891-910 | D:891-910)
View:
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All Exon Boundaries
01: Boundary 1.1/1.2a
02: Boundary 1.2a/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5c
05: Boundary 1.5c/1.6
06: Boundary 1.6/1.8b
07: Boundary 1.8b/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14
13: Boundary 1.14/1.15
14: Boundary 1.15/1.16
15: Boundary 1.16/1.17
16: Boundary 1.17/1.18a
17: Boundary 1.18a/1.19
18: Boundary 1.19/1.20
19: Boundary 1.20/1.21
20: Boundary 1.21/1.22
21: Boundary 1.22/1.23
22: Boundary 1.23/1.24
23: Boundary 1.24/1.25
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSGALT00000010534
1
ENSGALE00000265580
chr14:
7682699-7682648
52
MYH11_CHICK
-
0
0
-
-
1.2a
ENSGALT00000010534
2a
ENSGALE00000069834
chr14:
7676533-7676175
359
MYH11_CHICK
1-114
114
2
A:2-114
D:2-114
113
113
1.3
ENSGALT00000010534
3
ENSGALE00000069819
chr14:
7672123-7671967
157
MYH11_CHICK
115-167
53
2
A:115-167
D:115-167
53
53
1.4
ENSGALT00000010534
4
ENSGALE00000069808
chr14:
7662175-7662148
28
MYH11_CHICK
167-176
10
2
A:167-176
D:167-176
10
10
1.5c
ENSGALT00000010534
5c
ENSGALE00000218652
chr14:
7655986-7655868
119
MYH11_CHICK
176-216
41
2
A:176-216
D:176-216
41
41
1.6
ENSGALT00000010534
6
ENSGALE00000265350
chr14:
7655727-7655723
5
MYH11_CHICK
216-217
2
2
A:216-217
D:216-217
2
2
1.8b
ENSGALT00000010534
8b
ENSGALE00000069814
chr14:
7652106-7652014
93
MYH11_CHICK
218-248
31
2
A:218-248
D:218-248
31
31
1.9
ENSGALT00000010534
9
ENSGALE00000069809
chr14:
7651264-7651201
64
MYH11_CHICK
249-270
22
2
A:249-270
D:249-270
22
22
1.10
ENSGALT00000010534
10
ENSGALE00000069835
chr14:
7649276-7649178
99
MYH11_CHICK
270-303
34
2
A:270-303
D:270-303
34
34
1.11
ENSGALT00000010534
11
ENSGALE00000069796
chr14:
7648392-7648249
144
MYH11_CHICK
303-351
49
2
A:303-351
D:303-351
49
49
1.12
ENSGALT00000010534
12
ENSGALE00000069815
chr14:
7646944-7646849
96
MYH11_CHICK
351-383
33
2
A:351-383
D:351-383
33
33
1.13
ENSGALT00000010534
13
ENSGALE00000069806
chr14:
7646481-7646363
119
MYH11_CHICK
383-422
40
2
A:383-422
D:383-422
40
40
1.14
ENSGALT00000010534
14
ENSGALE00000069794
chr14:
7646205-7646053
153
MYH11_CHICK
423-473
51
2
A:423-473 (gaps)
D:423-473 (gaps)
51
51
1.15
ENSGALT00000010534
15
ENSGALE00000069826
chr14:
7645610-7645437
174
MYH11_CHICK
474-531
58
2
A:474-531
D:474-531
58
58
1.16
ENSGALT00000010534
16
ENSGALE00000069795
chr14:
7645244-7645071
174
MYH11_CHICK
532-589
58
2
A:532-589
D:532-589
58
58
1.17
ENSGALT00000010534
17
ENSGALE00000069803
chr14:
7644597-7644483
115
MYH11_CHICK
590-628
39
2
A:590-628
D:590-628
39
39
1.18a
ENSGALT00000010534
18a
ENSGALE00000069805
chr14:
7643649-7643456
194
MYH11_CHICK
628-692
65
2
A:628-692
D:628-692
65
65
1.19
ENSGALT00000010534
19
ENSGALE00000069801
chr14:
7643319-7643198
122
MYH11_CHICK
693-733
41
2
A:693-733
D:693-733
41
41
1.20
ENSGALT00000010534
20
ENSGALE00000069830
chr14:
7643082-7643013
70
MYH11_CHICK
733-756
24
2
A:733-756
D:733-756
24
24
1.21
ENSGALT00000010534
21
ENSGALE00000069797
chr14:
7642873-7642713
161
MYH11_CHICK
757-810
54
2
A:757-810
D:757-810
54
54
1.22
ENSGALT00000010534
22
ENSGALE00000069825
chr14:
7641848-7641740
109
MYH11_CHICK
810-846
37
2
A:810-846
D:810-846
37
37
1.23
ENSGALT00000010534
23
ENSGALE00000069816
chr14:
7640947-7640816
132
MYH11_CHICK
847-890
44
2
A:847-890
D:847-890
44
44
1.24
ENSGALT00000010534
24
ENSGALE00000069827
chr14:
7640531-7640325
207
MYH11_CHICK
891-959
69
2
A:891-910
D:891-910
20
20
1.25
ENSGALT00000010534
25
ENSGALE00000069800
chr14:
7639911-7639774
138
MYH11_CHICK
960-1005
46
0
-
-
1.26
ENSGALT00000010534
26
ENSGALE00000069831
chr14:
7639174-7639051
124
MYH11_CHICK
1006-1047
42
0
-
-
1.27
ENSGALT00000010534
27
ENSGALE00000069807
chr14:
7638569-7638398
172
MYH11_CHICK
1047-1104
58
0
-
-
1.28
ENSGALT00000010534
28
ENSGALE00000069824
chr14:
7637592-7637380
213
MYH11_CHICK
1104-1175
72
0
-
-
1.29
ENSGALT00000010534
29
ENSGALE00000069810
chr14:
7636952-7636808
145
MYH11_CHICK
1175-1223
49
0
-
-
1.31
ENSGALT00000010534
31
ENSGALE00000265418
chr14:
7635810-7635604
207
MYH11_CHICK
1224-1292
69
0
-
-
1.32
ENSGALT00000010534
32
ENSGALE00000069813
chr14:
7634411-7634307
105
MYH11_CHICK
1293-1327
35
0
-
-
1.33
ENSGALT00000010534
33
ENSGALE00000069832
chr14:
7634205-7634053
153
MYH11_CHICK
1328-1378
51
0
-
-
1.34
ENSGALT00000010534
34
ENSGALE00000069821
chr14:
7633701-7633453
249
MYH11_CHICK
1379-1461
83
0
-
-
1.35
ENSGALT00000010534
35
ENSGALE00000069838
chr14:
7633185-7632973
213
MYH11_CHICK
1462-1532
71
0
-
-
1.36
ENSGALT00000010534
36
ENSGALE00000069798
chr14:
7632301-7632089
213
MYH11_CHICK
1533-1603
71
0
-
-
1.37
ENSGALT00000010534
37
ENSGALE00000069812
chr14:
7631490-7631329
162
MYH11_CHICK
1604-1657
54
0
-
-
1.38
ENSGALT00000010534
38
ENSGALE00000069822
chr14:
7630578-7630450
129
MYH11_CHICK
1658-1700
43
0
-
-
1.39
ENSGALT00000010534
39
ENSGALE00000069818
chr14:
7630049-7629961
89
MYH11_CHICK
1701-1730
30
0
-
-
1.40
ENSGALT00000010534
40
ENSGALE00000069829
chr14:
7629720-7629597
124
MYH11_CHICK
1730-1771
42
0
-
-
1.41
ENSGALT00000010534
41
ENSGALE00000069839
chr14:
7629438-7629230
209
MYH11_CHICK
1772-1841
70
0
-
-
1.42
ENSGALT00000010534
42
ENSGALE00000069799
chr14:
7628730-7628622
109
MYH11_CHICK
1841-1877
37
0
-
-
1.43a
ENSGALT00000010534
43a
ENSGALE00000069837
chr14:
7628045-7627873
173
MYH11_CHICK
1878-1935
58
0
-
-
1.45a
ENSGALT00000010534
45a
ENSGALE00000265354
chr14:
7623923-7623255
669
MYH11_CHICK
1935-1979
45
0
-
-
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Asym.Unit (340 KB)
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